Evidence map›Paper›PMID 39957983›Full record

ArticleFrontiers in public health2025

The potential of genomic epidemiology: capitalizing on its practical use for impact in the healthcare setting.

Nicole Pacchiarini, Caoimhe McKerr, Mari Morgan, Thomas R Connor, Christopher Williams

Abstract read
In one paragraph

Article in Frontiers in public health, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Longitudinal surveillance and transmission ofAntimicrobial stewardship & healthcare epidemiology : ASHE · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicole Pacchiarini *Communicable Disease Surveillance Centre (CDSC), Public Health Wales, Cardiff, Wales, United Kingdom.
Caoimhe McKerr *Communicable Disease Surveillance Centre (CDSC), Public Health Wales, Cardiff, Wales, United Kingdom.
Mari MorganCommunicable Disease Surveillance Centre (CDSC), Public Health Wales, Cardiff, Wales, United Kingdom.
Thomas R ConnorPublic Health Genomics Programme, Public Health Wales, Cardiff, Wales, United Kingdom.
Christopher WilliamsCommunicable Disease Surveillance Centre (CDSC), Public Health Wales, Cardiff, Wales, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid detection and containment of healthcare-associated infections (HCAIs) is critical in preventing and controlling infectious disease outbreaks within healthcare settings. Whole genome sequencing (WGS) has emerged as a powerful tool for tracking the transmission dynamics of pathogens and when used alongside traditional epidemiological methods it can better inform our understanding of the pathogen origin, pathway and extent of transmission. Additionally, WGS can aid in identifying previously unrecognized reservoirs of infection, allowing for more effective control strategies and targeted interventions. This article describes the incorporation of WGS into infectious disease management in Wales and explores it in the context of COVID-19 and

Indexed as

COVID-19Cross InfectionGenomicsMolecular EpidemiologyWhole Genome SequencingClostridioides difficileClostridium InfectionsHumansSARS-CoV-2WalesClostridioides difficileCOVID-19healthcare acquired infectionsnosocomial infectionSARS-CoV-2sequencingwhole genome sequencing (WGS)

Identifiers

PMID39957983
PMCPMC11825496

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.