Evidence map›Paper›PMID 39957248›Full record

ArticleG3 (Bethesda, Md.)2025

VPS13D mutations affect mitochondrial homeostasis and locomotion in Caenorhabditis elegans.

Xiaomeng Yin, Ruoxi Wang, Andrea Thackeray, Eric H Baehrecke, Mark J Alkema

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

  • Update of
    2025
5 · Who and what money

Authors and funding

5 authors.

Xiaomeng YinDepartment of Neurobiology, University of Massachusetts Chan Medical School, University of Massachusetts, Worcester, MA 01605, USA.
Ruoxi WangDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, University of Massachusetts, Worcester, MA 01605, USA.
Andrea ThackerayDepartment of Neurobiology, University of Massachusetts Chan Medical School, University of Massachusetts, Worcester, MA 01605, USA.
Eric H BaehreckeDepartment of Molecular, Cell and Cancer Biology, University of Massachusetts Chan Medical School, University of Massachusetts, Worcester, MA 01605, USA.
Mark J AlkemaDepartment of Neurobiology, University of Massachusetts Chan Medical School, University of Massachusetts, Worcester, MA 01605, USA.ORCID 0000-0002-1311-5179

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of autophagy during animal developmentR35GM131689 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Eric H Baehrecke · 2019 to 2026
$4.9M
VPS13D, organelle contact, and cellular stress in models of diseaseR01AG082740 · NIA · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Eric H Baehrecke · 2023 to 2026
$1.7M
The impact of stress neurohormones on health and agingR01GM140480 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ALKEMA, MARK · 2021 to 2024
$1.5M
NIA NIH HHS R01 AG082740NIGMS NIH HHS R01 GM140480NIGMS NIH HHS R35 GM131689NIH HHS P40 OD010440NIH HHS R01 GM140480
6 · The paper itself

Abstract

Mitochondria control cellular metabolism, serve as hubs for signaling and organelle communication, and are important for the health and survival of cells. VPS13D encodes a cytoplasmic lipid transfer protein that regulates mitochondrial morphology, mitochondria and endoplasmic reticulum contact, and quality control of mitochondria. VPS13D mutations have been reported in patients displaying ataxic and spastic gait disorders with variable age of onset. Here, we used CRISPR/Cas9 gene editing to create VPS13D-related spinocerebellar ataxia-4 missense mutations and C-terminal deletion in VPS13D's ortholog vps-13D in Caenorhabditis elegans. Consistent with SCAR4 patient movement disorders and mitochondrial dysfunction, vps-13D mutant worms exhibit locomotion defects and abnormal mitochondrial morphology. Importantly, animals with a vps-13D deletion or a N3017I missense mutation exhibited an increase in mitochondrial unfolded protein response. The cellular and behavioral changes caused by VPS13D mutations in C. elegans advance the development of animal models that are needed to study SCAR4 pathogenesis.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsHomeostasisLocomotionMitochondriaMutationAnimalsCRISPR-Cas SystemsHumansUnfolded Protein ResponseCaenorhabditis elegans ProteinsCaenorhabditis elegansmitochondrial homeostasisvps-13DVPS13DWormBase

Identifiers

PMID39957248
PMCPMC12005150

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.