Evidence map›Paper›PMID 39957070›Full record

ArticleBiochemistry2025

Protein and DNA Conformational Changes Contribute to Specificity of Cre Recombinase.

Jonathan S Montgomery, Megan E Judson, Mark P Foster

Abstract read
In one paragraph

Article in Biochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Development and characterization of a Cre/Synthetic and systems biotechnology · 2027
    Article
  2. Thermodynamics of Indirect Readout in Cre-bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Jonathan S MontgomeryDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States.ORCID 0000-0003-2463-6671
Megan E JudsonDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States.
Mark P FosterDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States.ORCID 0000-0001-9645-7491

Funding

TRD3 NMRbox: Bayesian AnalyticsP41GM111135 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2015 to 2024
$14.0M
Molecular biophysics predoctoral training at the Ohio State UniversityT32GM144293 · NIGMS · OHIO STATE UNIVERSITY · PI CHARLES E BELL, Ralf A Bundschuh · 2022 to 2026
$1.1M
Protein Dynamics in Site-Specific DNA RecombinationR01GM122432 · NIGMS · OHIO STATE UNIVERSITY · PI FOSTER, MARK P. · 2017 to 2020
$1.1M
NIGMS NIH HHS P41 GM111135NIGMS NIH HHS R01 GM122432NIGMS NIH HHS T32 GM144293
6 · The paper itself

Abstract

Cre, a conservative site-specific tyrosine recombinase, is a powerful gene editing tool in the laboratory. Expanded applications in human health are hindered by a lack of understanding of the mechanism by which Cre selectively binds and recombines its cognate

Indexed as

DNAIntegrasesCalorimetryCircular DichroismHumansModels, MolecularNucleic Acid ConformationProtein BindingProtein ConformationSubstrate SpecificityThermodynamicsCre recombinaseDNAIntegrases

Identifiers

PMID39957070
PMCPMC12707689

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.