Evidence map›Paper›PMID 39956743›Full record

ReviewTrends in biochemical sciences2025

Small RNA and Toll-like receptor interactions: origins and disease mechanisms.

Jiancheng Yu, Xudong Zhang, Chen Cai, Tong Zhou, Qi Chen

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
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  5. Dissecting the small RNA code of inflammatory bowel disease.Molecular medicine (Cambridge, Mass.) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiancheng YuDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT, USA; Molecular Medicine Program, University of Utah School of Medicine, Salt Lake City, UT, USA.
Xudong ZhangDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT, USA; Molecular Medicine Program, University of Utah School of Medicine, Salt Lake City, UT, USA; Division of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA.
Chen CaiDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT, USA; Molecular Medicine Program, University of Utah School of Medicine, Salt Lake City, UT, USA; Division of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA.
Tong ZhouDepartment of Physiology and Cell Biology, University of Nevada, Reno School of Medicine, Reno, NV, USA. Electronic address: tongz@med.unr.edu.
Qi ChenDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT, USA; Molecular Medicine Program, University of Utah School of Medicine, Salt Lake City, UT, USA; Division of Urology, Department of Surgery, University of Utah School of Medicine, Salt Lake City, UT, USA. Electronic address: qi.chen@hsc.utah.edu.

Funding

Sperm tsRNAs/rsRNAs and their RNA modifications in diet-induced epigenetic inheritanceR01HD092431 · NICHD · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Qi Chen, David S Milstone · 2017 to 2026
$3.5M
Role of PXR in EDC-induced cardiovascular diseaseR35ES035015 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Changcheng Zhou · 2023 to 2026
$3.4M
Development of Next-Generation Mass Spectrometry-based de novo RNA Sequencing for all ModificationsR01HG012853 · NHGRI · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI Shenglong Zhang · 2023 to 2026
$2.6M
Decoding the signature of sperm RNA & RNA modification of environmental stressors on the intergenerational transmission of metabolic phenotypesR01ES032024 · NIEHS · UNIVERSITY OF UTAH · PI CHEN, QI, ZHOU, TONG · 2020 to 2024
$2.1M
NHGRI NIH HHS R01 HG012853NICHD NIH HHS R01 HD092431NIEHS NIH HHS R01 ES032024NIEHS NIH HHS R35 ES035015
6 · The paper itself

Abstract

Advances in small RNA sequencing have revealed diverse small noncoding RNAs (sncRNAs) beyond microRNAs (miRNAs), derived from transfer RNAs (tRNAs), ribosomal RNAs (rRNAs), small nuclear RNAs (snRNAs), and Y RNAs, carrying distinct RNA modifications. These emerging sncRNAs can function beyond RNA interference (RNAi), adopting aptamer-like roles by interacting with Toll-like receptors 7 and 8 (TLR7 and TLR8) via specific sequences, modifications, and structures. We propose a Sequential Activation Hypothesis where initial abnormal sncRNAs - triggered by infections or stresses - activate TLR7/8, leading to autoantibody production against autoantigens like RNA-binding proteins La and Ro. These autoantibody-antigen complexes further promote secondary immunogenic sncRNA production and repetitive TLR7/8 activation, perpetuating a vicious cycle sustaining autoimmunity. TLR7/8's X chromosome location and sex-biased expression contribute to female-dominant autoimmune diseases. Understanding sncRNA-TLR interactions is essential for designing novel therapeutic strategies.

Indexed as

Autoimmune DiseasesRNA, Small UntranslatedToll-Like Receptor 7Toll-Like Receptor 8Toll-Like ReceptorsAnimalsHumansRNA, Small UntranslatedToll-Like Receptor 7Toll-Like Receptor 8Toll-Like Receptorsautoimmune diseaseRNA modificationRNA therapeuticsrsRNAtsRNAysRNA

Identifiers

PMID39956743
PMCPMC12048287

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.