Evidence map›Paper›PMID 39953173›Full record

ArticleBotanical studies2025

Chromosome number variation and phylogenetic divergence of East Asian Cirsium sect. Onotrophe subsect. Nipponocirsium (Compositae), with a new species from Taiwan.

Chih-Yi Chang, Pei-Chun Liao, Hsy-Yu Tzeng, Junko Kusumi, Zhi-Hui Su, Yen-Hsueh Tseng

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Article in Botanical studies, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

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3citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Chih-Yi ChangTaiwan Forestry Research Institute, No. 53, Nanhai Rd., Zhongzheng Dist., Taipei, 10066, Taiwan.
Pei-Chun LiaoSchool of Life Science, National Taiwan Normal University, No. 88, Sec. 4, Ting-Chow Rd., Wenshan Dist. 116, Taipei, Taiwan.
Hsy-Yu TzengDepartment of Forestry, National Chung-Hsing University, No. 145, Hsing-Ta Rd., Taichung, 402, Taiwan.
Junko KusumiDepartment of Environmental Changes, Faculty of Social and Cultural Studies, Kyushu University, Fukuoka, 819-0395, Japan.
Zhi-Hui SuJT Biohistory Research Hall, Takatsuki, Osaka, 569-1125, Japan.
Yen-Hsueh TsengTaiwan Forestry Research Institute, No. 53, Nanhai Rd., Zhongzheng Dist., Taipei, 10066, Taiwan. tsengyh2014@tfri.gov.tw.ORCID http://orcid.org/0000-0003-3644-1863

Funding

National Science and Technology Council 110-2313-B-005-033-MY3
6 · The paper itself

Abstract

backgroundThis study explored chromosome number variation, phylogenetic divergence, and mechanisms underlying speciation in East Asian thistle Cirsium Mill. sect. Onotrophe (Cass.) DC. subsect. Nipponocirsium Kitam. (Compositae). The study focused on the newly identified species from Taiwan: Cirsium pengii Y.H. Tseng, P.C. Liao & Chih Y. Chang. Utilizing phylotranscriptomic data to reconstruct evolutionary relationships between the Taiwanese and Japanese taxa of Cirsium subsect. Nipponocirsium as well as their divergence times and chromosomal characteristics. Additionally, the chromosome number, morphology, and pollen morphology of the unknown Cirsium taxon are compared with other known subsect. Nipponocirsium taxa from Taiwan.

resultsPhylotranscriptomic analysis reveals a division within subsect. Nipponocirsium into Japanese and Taiwanese clades. In the Taiwanese clade, C. pengii is basal, while C. tatakaense remains monophyletic with other Taiwanese species despite higher genetic diversity. The prevalent chromosome number in this subsection is tetraploid (2n = 4x = 68), common in Japanese taxa, while Taiwanese members have 2n = 4x = 64. Notably, C. pengii has a diploid number (2n = 32), indicating descending dysploidy followed by polyploidization in Taiwan. This polyploidization, driven by glaciations, likely shaped the evolution of Nipponocirsium. Divergence time estimates suggest the separation of Japanese and Taiwanese clades around 0.74 million years ago (Myr) during glacial periods. Cirsium pengii diverged around 0.47 Myr, while tetraploid species C. kawakamii and C. tatakaense diverged around 0.35 Myr. These species likely evolved in separate refugia, with distinct species boundaries confirmed through species delimitation analysis, karyotype, morphology, and pollen morphology comparisons.

conclusionsThese findings enhance our understanding of chromosomal evolution and speciation within subsect. Nipponocirsium and underscore the importance of integrating transcriptomic data in phylogenetic studies. This study provides a comprehensive framework for further investigations into the genetic diversity and adaptive mechanisms of this ecologically vital group.

Indexed as

Descending dysploidyPhylotranscriptomicsPollen morphologyPolyploidizationTaxonomy

Identifiers

PMID39953173
PMCPMC11828781

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.