Evidence map›Paper›PMID 39946364›Full record

ArticlePloS one2025

FORCETRACKER: A versatile tool for standardized assessment of tissue contractile properties in 3D Heart-on-Chip platforms.

José M Rivera-Arbeláez, Milica Dostanić, Laura M Windt, Jeroen M Stein, Carla Cofiño-Fabres, Tom Boonen, Maury Wiendels, Albert van den Berg, Loes I Segerink, Christine L Mummery and 5 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

José M Rivera-ArbeláezMESA+Institute for Nanotechnology, BIOS Lab on a Chip Group, Technical Medical Centre, Max Planck Center for Com-plex Fluid Dynamics, University of Twente, Enschede, The Netherlands.ORCID https://orcid.org/0000-0002-0075-6006
Milica DostanićMicroelectronics, Delft University of Technology, Delft, The Netherlands.
Laura M WindtDepartment of Anatomy and Embryology, Leiden University Medical Centre, Leiden, The Netherlands.
Jeroen M SteinDepartment of Anatomy and Embryology, Leiden University Medical Centre, Leiden, The Netherlands.
Carla Cofiño-FabresDepartment of Bioengineering Technologies, Applied Stem Cell Technologies Group, Technical Medical Centre, University of Twente, Enschede, The Netherlands.
Tom BoonenRiver BioMedics, Enschede, The Netherlands.
Maury WiendelsDepartment of Anatomy and Embryology, Leiden University Medical Centre, Leiden, The Netherlands.
Albert van den BergMESA+Institute for Nanotechnology, BIOS Lab on a Chip Group, Technical Medical Centre, Max Planck Center for Com-plex Fluid Dynamics, University of Twente, Enschede, The Netherlands.
Loes I SegerinkMESA+Institute for Nanotechnology, BIOS Lab on a Chip Group, Technical Medical Centre, Max Planck Center for Com-plex Fluid Dynamics, University of Twente, Enschede, The Netherlands.ORCID https://orcid.org/0000-0001-6943-8156
Christine L MummeryDepartment of Bioengineering Technologies, Applied Stem Cell Technologies Group, Technical Medical Centre, University of Twente, Enschede, The Netherlands.
Pasqualina M SarroMicroelectronics, Delft University of Technology, Delft, The Netherlands.
Berend J van MeerDepartment of Anatomy and Embryology, Leiden University Medical Centre, Leiden, The Netherlands.
Marcelo C RibeiroRiver BioMedics, Enschede, The Netherlands.
Massimo MastrangeliMicroelectronics, Delft University of Technology, Delft, The Netherlands.ORCID https://orcid.org/0000-0003-3265-5768
Robert PassierDepartment of Bioengineering Technologies, Applied Stem Cell Technologies Group, Technical Medical Centre, University of Twente, Enschede, The Netherlands.ORCID https://orcid.org/0000-0003-4312-9296

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineered heart tissues (EHTs) have shown great potential in recapitulating tissue organization, functions, and cell-cell interactions of the human heart in vitro. Currently, multiple EHT platforms are used by both industry and academia for different applications, such as drug discovery, disease modelling, and fundamental research. The tissues' contractile force, one of the main hallmarks of tissue function and maturation level of cardiomyocytes, can be read out from EHT platforms by optically tracking the movement of elastic pillars induced by the contractile tissues. However, existing optical tracking algorithms which focus on calculating the contractile force are customized and platform-specific, often not available to the broad research community, and thus hamper head-to-head comparison of the model output. Therefore, there is the need for robust, standardized and platform-independent software for tissues' force assessment. To meet this need, we developed ForceTracker: a standalone and computationally efficient software for analyzing contractile properties of tissues in different EHT platforms. The software uses a shape-detection algorithm to single out and track the movement of pillars' tips for the most common shapes of EHT platforms. In this way, we can obtain information about tissues' contractile performance. ForceTracker is coded in Python and uses a multi-threading approach for time-efficient analysis of large data sets in multiple formats. The software efficiency to analyze circular and rectangular pillar shapes is successfully tested by analyzing different format videos from two EHT platforms, developed by different research groups. We demonstrate robust and reproducible performance of the software in the analysis of tissues over time and in various conditions. ForceTracker's detection and tracking shows low sensitivity to common incidental defects, such as alteration of tissue shape or air bubbles. Detection accuracy is determined via comparison with manual measurements using the software ImageJ. We developed ForceTracker as a tool for standardized analysis of contractile performance in EHT platforms to facilitate research on disease modeling and drug discovery in academia and industry.

Indexed as

HeartLab-On-A-Chip DevicesMyocardial ContractionMyocytes, CardiacSoftwareTissue EngineeringAlgorithmsAnimalsHumans

Identifiers

PMID39946364
PMCPMC11825004

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.