Evidence map›Paper›PMID 39946266›Full record

ArticleJournal of applied clinical medical physics2025

Evaluation and failure analysis of four commercial deep learning-based autosegmentation software for abdominal organs at risk.

Mingdong Fan, Tonghe Wang, Yang Lei, Pretesh R Patel, Sean Dresser, Beth Bradshaw Ghavidel, Richard L J Qiu, Jun Zhou, Kirk Luca, Oluwatosin Kayode and 3 more

Abstract readEvaluation Study
In one paragraph

Article in Journal of applied clinical medical physics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Mingdong FanDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.
Tonghe WangDepartment of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Yang LeiDepartment of Radiation Oncology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.ORCID https://orcid.org/0000-0002-3572-0345
Pretesh R PatelDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.
Sean DresserDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-8191-0852
Beth Bradshaw GhavidelDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.
Richard L J QiuDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-7877-1900
Jun ZhouDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-6078-9424
Kirk LucaDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-3781-6666
Oluwatosin KayodeDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.
Jeffrey D BradleyDepartment of Radiation Oncology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Xiaofeng YangDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0001-9023-5855
Justin RoperDepartment of Radiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Real-time Volumetric Imaging for Motion Management and Dose Delivery VerificationR01CA272991 · NCI · EMORY UNIVERSITY · PI Zhen Tian, Xiaofeng Yang · 2023 to 2026
$2.3M
Intelligent and Personalized Online Adaptive Proton TherapyR01DE033512 · NIDCR · UNIVERSITY OF CHICAGO · PI Zhen Tian, Xiaofeng Yang · 2024 to 2026
$1.8M
Artificial Intelligence Driven Platform for PET/MR ImagingR56EB033332 · NIBIB · EMORY UNIVERSITY · PI MAO, HUI, YANG, XIAOFENG · 2022 to 2022
$764k
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA272991NIBIB NIH HHS R56 EB033332NIDCR NIH HHS R01 DE033512NIH HHS P30CA008748NIH HHS R01CA272991NIH HHS R01DE033512NIH HHS R56EB033332
6 · The paper itself

Abstract

purposeDeep learning-based segmentation of organs-at-risk (OAR) is emerging to become mainstream in clinical practice because of the superior performance over atlas and model-based autocontouring methods. While several commercial deep learning-based autosegmentation solutions are now available, the implementation of these tools is still at such a primitive stage that acceptance criteria are underdeveloped due to a lack of knowledge about the systems' segmentation tendencies and failure modes. As the starting point of the iterative process of clinical implementation, this study focuses on the outlier analysis of four commercial autocontouring tools for the abdominal OARs. MATERIALS AND

methodsThe autosegmentation software, developed by Limbus AI, MIM Contour ProtégéAI, Radformation AutoContour, and Siemens syngo.via, were used to segment 111 patient cases. Geometric segmentation accuracy was quantitatively compared with clinical contours using the dice similarity coefficient (DSC) and 95% Hausdorff distance (HD95). The outliers from quantitative evaluations of each software were analyzed for the liver, stomach, and kidneys with the possible causes of outliers summarized into six categories: (1) difference in contouring style or guideline, (2) image acquisition and quality, (3) abnormal anatomy of the OAR, (4) abnormal anatomy of abutting organs/tissues, (5) external/internal devices, and (6) other causes.

resultsFor the liver segmentation, the most prominent cause of discrepancies for Limbus, which occurred in four of its six outliers, was the existence of biliary stent or internal/external biliary drain as well as the resulting pneumobilia. Siemens included the abutting organs that shared CT numbers similar to those of the liver in 5/8 outliers. 12 of 13 Radformation's liver segmentation outliers included the heart and/or stomach while MIM not only included the stomach in the presence of barium in 5/11 outliers, but also produced fragmented contours in 5/11 other cases. Only Limbus and Radformation provided stomach segmentation, and imaging with barium contrast directly caused incomplete stomach delineation in 10/12 Limbus outliers and 21/25 Radformation outliers. As for the kidneys, Radformation and Siemens consistently followed the RTOG contouring guidelines, whereas the institutional contours excluded the renal pelvis in some cases, resulting in 19/25 Radformation outliers and 18/23 Siemens outliers. By contrast, Limbus contours appeared to follow different contouring guidelines that exclude the renal pelvis. Fragmented kidney contours were found in 10/15 Limbus outliers and 25/26 MIM outliers. The ones in MIM were directly linked to the use of IV contrast in imaging, but there was not enough evidence to identify the origin of Limbus's fragmented contours.

conclusionThe causes of the segmentation outliers of the four commercial deep learning-based autocontouring solutions were summarized for each OAR. This work can help the vendors improve their autosegmentation software and also inform the users of potential modes of failure when using the tools.

Indexed as

Deep LearningImage Processing, Computer-AssistedOrgans at RiskRadiotherapy Planning, Computer-AssistedSoftwareAlgorithmsHumansRadiotherapy DosageRadiotherapy, Intensity-ModulatedTomography, X-Ray Computedartificial intelligenceautosegmentationorgans at riskoutlier analysis

Identifiers

PMID39946266
PMCPMC11969109

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.