Evidence map›Paper›PMID 39946203›Full record

ArticleJCI insight2025

Antisense oligonucleotides modulate aberrant inclusion of poison exons in SCN1A-related Dravet syndrome.

Sheng Tang, Hannah Stamberger, Jeffrey D Calhoun, Sarah Weckhuysen, Gemma L Carvill

Abstract read
In one paragraph

Article in JCI insight, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Augmenting and Assaying Nav1.1 Protein Quantity for Dravet Syndrome Therapy.Annals of clinical and translational neurology · 2026
    Article
  2. Article
  3. Review
  4. Treatment of pediatric epilepsy.Pediatric investigation · 2026
    Review
  5. Aberrant Splicing ofCirculation. Genomic and precision medicine · 2026
    Article
  6. Review
  7. Review
  8. Review
  9. Dravet syndrome: novel insights intoFrontiers in neuroscience · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sheng TangDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Hannah StambergerApplied & Translational Neurogenomics Group, VIB Center for Molecular Neurology, VIB, Antwerp, Belgium.
Jeffrey D CalhounDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Sarah WeckhuysenApplied & Translational Neurogenomics Group, VIB Center for Molecular Neurology, VIB, Antwerp, Belgium.
Gemma L CarvillDepartment of Neurology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.

Funding

LABORATORY OF DEVELOPMENTAL BIOLOGYR24HD000836 · NICHD · UNIVERSITY OF WASHINGTON · PI Ian Amos Glass · 1995 to 2026
$16.9M
Poison exons in epilepsy and neurodevelopmentR01NS134938 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Gemma Louise Carvill · 2024 to 2026
$1.7M
The role of poison exons in neurodevelopmentR21NS121572 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CARVILL, GEMMA LOUISE · 2021 to 2021
$440k
Research Education Program for Trainees in NeurologyUE5NS070695 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI JOHN A KESSLER, Lesli Elizabeth Skolarus · 2024 to 2026
$107k
NICHD NIH HHS R24 HD000836NINDS NIH HHS R01 NS134938NINDS NIH HHS R21 NS121572NINDS NIH HHS UE5 NS070695
6 · The paper itself

Abstract

Dravet syndrome is a developmental and epileptic encephalopathy associated with pathogenic variants in SCN1A. Most disease-causing variants are located within coding regions, but recent work has shed light on the role of noncoding variants associated with a poison exon in intron 20 of SCN1A. Discovery of the SCN1A poison exon known as 20N has led to the first potential disease-modifying therapy for Dravet syndrome in the form of an antisense oligonucleotide. Here, we demonstrate the existence of 2 additional poison exons in introns 1 and 22 of SCN1A through targeted, deep-coverage long-read sequencing of SCN1A transcripts. We show that inclusion of these poison exons is developmentally regulated in the human brain, and that deep intronic variants associated with these poison exons lead to their aberrant inclusion in vitro in a minigene assay or in iPSC-derived neurons. Additionally, we show that splice-modulating antisense oligonucleotides can ameliorate aberrant inclusion of poison exons. Our findings highlight the role of deep intronic pathogenic variants in disease and provide additional therapeutic targets for precision medicine in Dravet syndrome and other SCN1A-related disorders.

Indexed as

Epilepsies, MyoclonicExonsNAV1.1 Voltage-Gated Sodium ChannelOligonucleotides, AntisenseBrainHumansIntronsNeuronsNAV1.1 Voltage-Gated Sodium ChannelOligonucleotides, AntisenseSCN1A protein, humanEpilepsyGene therapyGeneticsNeuroscience

Identifiers

PMID39946203
PMCPMC11981616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.