Evidence map›Paper›PMID 39946175›Full record

ArticleInflammatory bowel diseases2025

Mitochondrial Dysfunction: Unraveling the Elusive Biology Behind Anti-TNF Response During Ulcerative Colitis.

Dimitrios Kioroglou, Ainize Peña-Cearra, Ana M Corraliza, Iratxe Seoane, Janire Castelo, Julian Panés, Laura Gómez-Irwin, Iago Rodríguez-Lago, Jone Ortiz de Zarate, Miguel Fuertes and 8 more

Abstract read
In one paragraph

Article in Inflammatory bowel diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Dimitrios KioroglouIntegrative Genomics Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Basque Country, Spain.ORCID 0000-0003-3495-4585
Ainize Peña-CearraInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.ORCID 0000-0003-3855-6664
Ana M CorralizaCentro de Investigación Biomédica en Red de Enfermedades Hepática y Digestivas (CIBERehd), ISCIII, Barcelona, Spain.
Iratxe SeoaneInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.ORCID 0009-0008-4284-1381
Janire CasteloInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.ORCID 0000-0002-9628-8242
Julian PanésCentro de Investigación Biomédica en Red de Enfermedades Hepática y Digestivas (CIBERehd), ISCIII, Barcelona, Spain.
Laura Gómez-IrwinDepartamento de Gastroenterología, Hospital Universitario de Cruces and Biobizkaia Health Research Institute, 48903 Barakaldo, Spain.
Iago Rodríguez-LagoDepartamento de Gastroenterología, Hospital Universitario de Galdakao and Biobizkaia Health Research Institute, 48960 Galdakao, Spain.ORCID 0000-0003-1133-4578
Jone Ortiz de ZarateDepartamento de Gastroenterología, Hospital Universitario de Basurto, 48013 Bilbao, Bizkaia, Spain.
Miguel FuertesNEIKER-Basque Institute for Agricultural Research and Development, Basque Research and Technology Alliance (BRTA), Bizkaia Science and Technology Park, Building 812L, 48160, Derio, Spain.
Itziar Martín-RuizInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.
Monika GonzalezGAP, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.
Ana M AransayCentro de Investigación Biomédica en Red de Enfermedades Hepática y Digestivas (CIBERehd), ISCIII, Barcelona, Spain.ORCID 0000-0002-8271-612X
Azucena SalasCentro de Investigación Biomédica en Red de Enfermedades Hepática y Digestivas (CIBERehd), ISCIII, Barcelona, Spain.ORCID 0000-0003-4572-2907
Héctor RodríguezInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.
Juan AnguitaInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.
Leticia AbeciaInflammation and Macrophage Plasticity Laboratory, CIC bioGUNE-BRTA (Basque Research and Technology Alliance), Derio 48160, Spain.ORCID 0000-0003-4097-8903
Urko M MarigortaIntegrative Genomics Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Basque Country, Spain.ORCID 0000-0002-9087-6609

Funding

"la Caixa" Foundation ID 100010434Spanish Ministry of Science MCIN/AEI/10.13039/501100011033
6 · The paper itself

Abstract

backgroundRecent studies hint at mitochondrial genes influencing UC patient response to anti-TNF treatment. We evaluated this hypothesis by following a targeted strategy to identify gene expression that captures the relationship between mitochondrial dysregulation and response to treatment. Our objective was to initially examine this relationship in colon samples and subsequently assess whether the resulting signal persists in the bloodstream.

methodsWe analyzed the transcriptome of colon samples from an anti-TNF-treated murine model characterized by impaired mitochondrial activity and treatment resistance. We then transferred the findings that linked mitochondrial dysfunction and compromised treatment response to an anti-TNF-treated UC human cohort. We next matched differential expression in the blood using monocytes from the peripheral blood of controls and IBD patients, and we evaluated a classification process at baseline with whole blood samples from UC patients.

resultsIn human colon samples, the derived gene set from the murine model showed differential expression, primarily enriched metabolic pathways, and exhibited similar classification capacity as genes enriching inflammatory pathways. Moreover, the evaluation of the classification signal using blood samples from UC patients at baseline highlighted the involvement of mitochondrial homeostasis in treatment response.

conclusionsOur results highlight the involvement of metabolic pathways and mitochondrial homeostasis in determining treatment response and their ability to provide promising classification signals with detection levels in both the colon and the bloodstream.

Indexed as

Colitis, UlcerativeMitochondriaTumor Necrosis Factor-alphaAdultAnimalsCase-Control StudiesColonDisease Models, AnimalFemaleHumansMaleMiceMiddle AgedTranscriptomeTumor Necrosis Factor-alphaanti-TNFmitochondriatranscriptomicsulcerative colitis

Identifiers

PMID39946175
PMCPMC12069986

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.