Evidence map›Paper›PMID 39945540›Full record

ArticleBiology of the cell2025

Impact of triplet state population on GFP-type fluorescence and photobleaching.

Martin Byrdin, Svetlana Byrdina

Abstract read
In one paragraph

Article in Biology of the cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Martin ByrdinInstitut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, Grenoble, France.ORCID https://orcid.org/0000-0002-6389-8714
Svetlana ByrdinaUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, IRD, Univ. Gustave Eiffel, ISTerre, Grenoble, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background informationBased on recently published parameters (Rane et al. 2023, JPCB 127, 5046-5054) for (rs)EGFP triplet state formation and decay rates and yields, we consider the power density dependence of triplet state population dynamics and its consequences for the application of green fluorescent proteins in biological single molecule fluorescence microscopy.

resultsWe find that under certain conditions, the photon budget of GFP type fluorescent proteins can be linearly dependent on power density and we propose a possible explanation for such a non-Hirschfeld photobleaching behavior. Moreover, illumination with millisecond pulses at sub-kHz rates is shown to improve photostability.

conclusionsWe stipulate that a judicious choice of excitation wavelength should take into account the triplet state absorption spectrum along with the singlet state absorption spectrum. Formulas are given for the estimation of the effects of such choice as function of the experimental parameters. SIGNIFICANCE: The linear photobleaching model as proposed by Hirschfeld 50 years ago with power-independent photon budget is not generally applicable to fluorescent proteins with millisecond-lived triplet states.

Indexed as

Green Fluorescent ProteinsPhotobleachingFluorescenceMicroscopy, FluorescencePhotonsGreen Fluorescent Proteinsbiological microscopycryotemperaturefluorescent probesphoton budgetphotophysicspower density dependencersEGFP2 off state

Identifiers

PMID39945540
PMCPMC11823621

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.