Evidence map›Paper›PMID 39943745›Full record

ArticleGenome biology and evolution2025

Small but Mitey: A Gapless Telomere-to-Telomere Assembly of an Unidentified Mite With a Streamlined Genome.

Richard J Edwards, Stephanie H Chen, Bruce Halliday, Jason G Bragg

Abstract read
In one paragraph

Article in Genome biology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Richard J EdwardsSchool of Biotechnology and Biomolecular Sciences, Evolution & Ecology Research Centre, University of New South Wales, Kensington, NSW 2052, Australia.ORCID 0000-0002-3645-5539
Stephanie H ChenSchool of Biotechnology and Biomolecular Sciences, Evolution & Ecology Research Centre, University of New South Wales, Kensington, NSW 2052, Australia.ORCID 0000-0001-8844-6864
Bruce HallidayAustralian National Insect Collection, CSIRO, Canberra, ACT 2601, Australia.ORCID 0000-0003-1909-998X
Jason G BraggResearch Centre for Ecosystem Resilience, Botanic Gardens of Sydney, Sydney, NSW 2000, Australia.ORCID 0000-0002-7621-7295

Funding

Australian Research Council LP18010072
6 · The paper itself

Abstract

A draft assembly of the rainforest tree Rhodamnia argentea Benth. (malletwood, Myrtaceae) revealed contaminating DNA sequences that most closely matched those from mites in the family Eriophyidae. Eriophyoid mites are plant parasites that often induce galls or other deformities on their host plants. They are notable for their small size (averaging 200 μm), distinctive four-legged body structure, and heavily streamlined genomes, which are among the smallest known of all arthropods. Contaminating mite sequences were assembled into a high-quality gapless telomere-to-telomere nuclear genome. The entire genome was assembled on two fully contiguous chromosomes, capped with a novel TTTGG or TTTGGTGTTGG telomere sequence, and exhibited clear signs of genome reduction (34.5 Mbp total length, 68.6% arachnid Benchmarking Universal Single-Copy Ortholog completeness). Phylogenomic analysis confirmed that this genome is that of a previously unsequenced eriophyoid mite. Despite its unknown identity, this complete nuclear genome provides a valuable resource to investigate invertebrate genome reduction.

Indexed as

GenomeMitesTelomereAnimalsPhylogenycontaminationeriophyoideagenome assemblygenome reductiongenome streamlining

Identifiers

PMID39943745
PMCPMC11879100

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.