Evidence map›Paper›PMID 39939664›Full record

ArticleScientific reports2025

Comprehensive analysis of LRRC42 as a potential biomarker and key cellular processes in cancer development.

Rongfu Huang, Jianfeng Yao, Lei Liu, Hua Li, Baoshan Huang

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rongfu HuangLaboratory medicine, The Second Affiliated Hospital, Fujian Medical University, Quanzhou, 362000, Fujian, China.
Jianfeng YaoDepartment of gynaecology and obstetrics, Quanzhou Maternity and Child Health Care Hospital, Quanzhou, 362000, Fujian, China.
Lei LiuLaboratory medicine, The Second Affiliated Hospital, Fujian Medical University, Quanzhou, 362000, Fujian, China.
Hua Li *Department of General Surgery, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, Guangxi, China. lihua_gx@ymun.edu.cn.
Baoshan Huang *Pediatrics, The Second Affiliated Hospital, Fujian Medical University, Quanzhou, 362000, Fujian, China. 116424385@qq.com.

Funding

Natural Science Foundation of Fujian Province 2022J01771the Second Affiliated Hospital of Fujian Medical University No.2021MP18
6 · The paper itself

Abstract

This study investigated the role of LRRC42 in tumor development and progression using comprehensive methodologies. Analysis of RNA-seq data from the TCGA database revealed that LRRC42 expression is upregulated in various tumor tissues, including bladder cancer (BLCA), breast cancer (BRCA), cholangiocarcinoma (CHOL), colorectal cancer (COAD), esophageal cancer (ESCA), glioblastoma (GBM), head and neck squamous cell carcinoma (HNSC), liver hepatocellular carcinoma (LIHC), lung adenocarcinoma (LUAD), and skin cutaneous melanoma (SKCM), compared to normal tissues. Conversely, LRRC42 was significantly downregulated in kidney chromophobe (KICH) and thyroid carcinoma (THCA) tissues. Single-cell analysis using the TISCH2 database highlighted high LRRC42 expression levels in specific subpopulations across different cancers. Correlation analyses indicated associations between LRRC42 expression and prognosis in multiple tumors, linking it to poor overall survival in several cancer types. Investigations into LRRC42's interactions with the tumor immune microenvironment and signaling pathways demonstrated significant correlations with immune cells, epithelial-mesenchymal transition molecules, autophagy-related factors, and pyroptosis-related molecules. Focusing on LRRC42's potential role in hepatocellular carcinoma (HCC), the study uncovered co-expression relationships with Th2 cells and identified genes enriched in mRNA processing and cell cycle regulation pathways. Functional validation through LRRC42 knockdown experiments revealed its critical involvement in promoting cell proliferation, migration, and invasion in HCC cell lines. Collectively, these findings emphasize LRRC42 as a promising therapeutic target for inhibiting HCC progression and suggest its pivotal role in modulating key cellular processes integral to HCC advancement.

Indexed as

Biomarkers, TumorNeoplasmsNerve Tissue ProteinsCarcinoma, HepatocellularCell Line, TumorCell ProliferationEpithelial-Mesenchymal TransitionGene Expression Regulation, NeoplasticHumansLiver NeoplasmsPrognosisTumor MicroenvironmentBiomarkers, TumorNerve Tissue ProteinsCell MigrationImmune MicroenvironmentLRRC42Progression biomarkerRNA-seq

Identifiers

PMID39939664
PMCPMC11821809

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.