Evidence map›Paper›PMID 39937814›Full record

ArticlePloS one2025

The relation of nasopharyngeal colonization by Streptococcus pneumoniae in comorbid adults with unfavorable outcomes in a low-middle income country.

Juan Olivella-Gomez, Julián Lozada, Cristian C Serrano-Mayorga, Lina Méndez-Castillo, Alejandro Acosta-González, André Emilio Viñán Garcés, Ingrid G Bustos, Elsa D Ibáñez-Prada, Yuli V Fuentes, Ana M Crispin and 10 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Juan Olivella-GomezSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Julián LozadaSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Cristian C Serrano-MayorgaSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Lina Méndez-CastilloClínica Universidad de La Sabana, Chía, Colombia.
Alejandro Acosta-GonzálezUnisabana Center for Translational Science, Universidad de La Sabana, Chía, Colombia.
André Emilio Viñán GarcésUnisabana Center for Translational Science, Universidad de La Sabana, Chía, Colombia.
Ingrid G BustosSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Elsa D Ibáñez-PradaUnisabana Center for Translational Science, Universidad de La Sabana, Chía, Colombia.ORCID https://orcid.org/0000-0002-2617-1137
Yuli V FuentesSchool of Medicine, Universidad de La Sabana, Chía, Colombia.ORCID https://orcid.org/0000-0003-3869-8195
Ana M CrispinUnisabana Center for Translational Science, Universidad de La Sabana, Chía, Colombia.
Erica Y Garcia-GarciaClínica Universidad de La Sabana, Chía, Colombia.
Eveling SantanaClínica Universidad de La Sabana, Chía, Colombia.
Diego F JosaSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Jorge Pulido SaenzRenal Care Services Baxter, Chía, Colombia.
Gina Paola Rodíguez-CastañoGrupo de Investigación en Bioprospección (G.I.B.P.), Faculty of Engineering, Universidad de La Sabana, Chía, Colombia.
Jorge Alberto Rodríguez OrjuelaGrupo de Investigación en Bioprospección (G.I.B.P.), Faculty of Engineering, Universidad de La Sabana, Chía, Colombia.
Diego JaimesSchool of Medicine, Universidad de La Sabana, Chía, Colombia.
Hervé TettelinDepartment of Microbiology and Immunology, Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Carlos J OrihuelaDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Luis Felipe ReyesSchool of Medicine, Universidad de La Sabana, Chía, Colombia.ORCID https://orcid.org/0000-0003-1172-6539

Funding

Cardiac microlesion formation during invasive pneumococcal diseaseR01AI114800 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Carlos J Orihuela, Herve S TETTELIN · 2015 to 2026
$5.1M
Molecular mechanisms underlying organ penetration in disseminated pneumococcal infectionR01AI172796 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Carlos J Orihuela, Min Xie · 2023 to 2026
$2.6M
PspA binds necroptotic cells to cause disease and transmitR01AI156898 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ORIHUELA, CARLOS J · 2020 to 2024
$2.0M
NIAID NIH HHS R01 AI114800NIAID NIH HHS R01 AI156898NIAID NIH HHS R01 AI172796
6 · The paper itself

Abstract

purposeStreptococcus pneumoniae (Spn) is the primary bacterial cause of lower respiratory tract infections (LRTI) globally, particularly impacting older adults and children. While Spn colonization in children is linked to LRTI, its prevalence, and consequences in adults with comorbidities remain uncertain. This study aims to provide novel data in that regard.

methodsThis prospective study of outpatient adults with chronic diseases was conducted in Colombia. Data on demographics, vaccination, and clinical history was collected in a RedCap database. Nasopharyngeal aspirate samples were examined for Spn colonization using traditional cultures and quantitative-real time polymerase chain reaction (q-rtPCR). Patients were followed for 18 months, with colonization prevalence calculated and factors influencing colonization and its impact on clinical outcomes analyzed through logistic regressions.

results810 patients were enrolled, with 10.1% (82/810) identified as colonized. The mean (SD) age was 62 years (±15), and 48.6% (394/810) were female. Major comorbidities included hypertension (52.2% [423/810]), cardiac conditions (31.1% [252/810]), and chronic kidney disease (17.4% [141/810]). Among all, 31.6% (256/810) received the influenza vaccine in the previous year, and 10.7% (87/810) received anti-Spn vaccines. Chronic kidney disease (OR 95% CI; 2.48 [1.01-6.15], p = 0.04) and chronic cardiac diseases (OR 95% CI; 1.62 [0.99-2.66], p = 0.05) were independently associated with Spn colonization. However, colonization was not associated with the development of LRTI (OR 95%CI; 0.64 [0.14-2.79], p = 0.55) or unfavorable outcomes (OR 95% CI;1.17 [0.14-2.79], p = 0.54) during follow-up.

conclusionsChronic kidney and cardiac diseases are independently associated with Spn colonization. However, Spn colonization was not associated with LRTI/unfavorable outcomes in adult patients with chronic comorbidities in our cohort.

Indexed as

NasopharynxPneumococcal InfectionsRespiratory Tract InfectionsStreptococcus pneumoniaeAdultAgedColombiaComorbidityFemaleHumansMaleMiddle AgedPrevalenceProspective Studies

Identifiers

PMID39937814
PMCPMC11819510

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.