Evidence map›Paper›PMID 39934437›Full record

ArticleNature biomedical engineering2025

Synaptic connectivity mapping among thousands of neurons via parallelized intracellular recording with a microhole electrode array.

Jun Wang, Woo-Bin Jung, Rona S Gertner, Hongkun Park, Donhee Ham

Abstract read
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In one paragraph

Article in Nature biomedical engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. An Intelligent Magneto-Mechanical Platform for Cellular Sensing in 3D Microenvironments.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jun Wang *John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-8955-3530
Woo-Bin Jung *John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
Rona S GertnerDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
Hongkun ParkDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA. Hongkun_Park@harvard.edu.ORCID http://orcid.org/0000-0001-9576-8829
Donhee HamJohn A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA. donhee@seas.harvard.edu.ORCID http://orcid.org/0000-0001-6925-2466

Funding

Samsung A37734Samsung A37738
6 · The paper itself

Abstract

The massive parallelization of neuronal intracellular recording, which enables the measurement of synaptic signals across a neuronal network, and thus the mapping and characterization of synaptic connections, is an open challenge, with the state of the art being limited to the mapping of about 300 synaptic connections. Here we report a 4,096 platinum/platinum-black microhole electrode array fabricated on a complementary metal-oxide semiconductor chip for parallel intracellular recording and thus for synaptic-connectivity mapping. The microhole-neuron interface, together with current-clamp electronics in the underlying semiconductor chip, allowed a 90% average intracellular coupling rate in rat neuronal cultures, generating network-wide intracellular-recording data with abundant synaptic signals. From these data, we extracted more than 70,000 plausible synaptic connections among more than 2,000 neurons and catalogued them into electrical synaptic connections and into inhibitory, weak/uneventful excitatory and strong/eventful excitatory chemical synaptic connections, with an estimated overall error rate of about 5%. This scale of synaptic-connectivity mapping and the ability to characterize synaptic connections is a step towards the functional connectivity mapping of large-scale neuronal networks.

Indexed as

NeuronsSynapsesAnimalsCells, CulturedMicroelectrodesNerve NetPlatinumRatsSemiconductorsPlatinum

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.