Evidence map›Paper›PMID 39934334›Full record

ArticleNature cell biology2025

Rpl12 is a conserved ribophagy receptor.

Yuting Chen, Jiaxin Hu, Pengwei Zhao, Jie Fang, Yingqi Kuang, Zhaojie Liu, Shuling Dong, Weijing Yao, Yuanyuan Ding, Xinhui Wang and 23 more

Abstract read
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In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  5. Core principles of autophagy initiation mechanisms.Nature structural & molecular biology · 2026
    Review
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  7. Review
  8. Article
  9. Article
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  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Yuting Chen *Department of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0002-0595-5717
Jiaxin Hu *Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China.
Pengwei Zhao *Department of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Jie Fang *The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China.
Yingqi KuangDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Zhaojie LiuState Key Laboratory of Respiratory Disease, Guangzhou Municipal and Guangdong Provincial Key Laboratory of Protein Modification and Degradation, School of Basic Medical Sciences, Guangzhou Medical University, Guangzhou, China.
Shuling DongDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Weijing YaoDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Yuanyuan DingSchool of Pharmaceutical Science and Technology, Tianjin University, Tianjin, China.
Xinhui WangSchool of Public Health, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0001-7713-6262
Yibin PanAssisted Reproduction Unit, Department of Obstetrics and Gynecology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Jianbin WuDepartment of Pathology of Sir Run Run Shaw Hospital, and Department of Human Anatomy, Histology and Embryology, System Medicine Research Center, NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0009-0003-0160-7429
Jingwei ZhaoDepartment of Pathology of Sir Run Run Shaw Hospital, and Department of Human Anatomy, Histology and Embryology, System Medicine Research Center, NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0002-1135-9743
Jing YangDepartment of Neurobiology and Department of Anesthesiology of First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Zhenzhong XuDepartment of Neurobiology and Department of Anesthesiology of First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0001-6578-211X
Xiaodi LiuState Key Laboratory of Respiratory Disease, Guangzhou Municipal and Guangdong Provincial Key Laboratory of Protein Modification and Degradation, School of Basic Medical Sciences, Guangzhou Medical University, Guangzhou, China.
Yi ZhangDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Choufei WuKey Laboratory of Vector Biology and Pathogen Control of Zhejiang Province, School of Life Sciences, Huzhou University, Huzhou, China.
Liqin ZhangKey Laboratory of Vector Biology and Pathogen Control of Zhejiang Province, School of Life Sciences, Huzhou University, Huzhou, China.
Mingzhu FanMass Spectrometry and Metabolomics Core Facility, Key Laboratory of Structural Biology of Zhejiang Province, Westlake University, Hangzhou, China.
Shan FengMass Spectrometry and Metabolomics Core Facility, Key Laboratory of Structural Biology of Zhejiang Province, Westlake University, Hangzhou, China.ORCID http://orcid.org/0000-0001-6474-4429
Zhi HongDepartment of Neurology, the Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University, Hangzhou, China.
Zhangming YanSchool of Life Sciences, Tsinghua University, Beijing, China.
Hongguang XiaDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0003-3044-9282
Kaiyue TangZhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, China.
Bing YangZhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, China.ORCID http://orcid.org/0000-0001-6739-2932
Wei LiuDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0002-8033-4718
Qiming SunDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID http://orcid.org/0000-0003-4988-9886
Kunrong MeiSchool of Pharmaceutical Science and Technology, Tianjin University, Tianjin, China. kmei@tju.edu.cn.ORCID http://orcid.org/0000-0001-7827-2944
Wei ZouThe Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China. zouwei@zju.edu.cn.ORCID http://orcid.org/0000-0003-4885-7313
Yunpeng HuangKey Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China. huangyp@ucas.ac.cn.ORCID http://orcid.org/0000-0003-4116-7934
Du FengState Key Laboratory of Respiratory Disease, Guangzhou Municipal and Guangdong Provincial Key Laboratory of Protein Modification and Degradation, School of Basic Medical Sciences, Guangzhou Medical University, Guangzhou, China. Fenglab@gzhmu.edu.cn.ORCID http://orcid.org/0000-0002-2489-4702
Cong YiDepartment of Biochemistry and Department of Hepatobiliary and Pancreatic Surgery of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China. yiconglab@zju.edu.cn.ORCID http://orcid.org/0000-0001-6853-6563

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31970919National Natural Science Foundation of China (National Science Foundation of China) 32070739National Natural Science Foundation of China (National Science Foundation of China) 32100600National Natural Science Foundation of China (National Science Foundation of China) 32122028National Natural Science Foundation of China (National Science Foundation of China) 32370822National Natural Science Foundation of China (National Science Foundation of China) 92254307Natural Science Foundation of Zhejiang Province (Zhejiang Provincial Natural Science Foundation) LR21C070001
6 · The paper itself

Abstract

Ribophagy is a selective autophagic process that regulates ribosome turnover. Although NUFIP1 has been identified as a mammalian receptor for ribophagy, its homologues do not exist in yeast and nematodes. Here we demonstrate that Rpl12, a ribosomal large subunit protein, functions as a conserved ribophagy receptor in multiple organisms. Disruption of Rpl12-Atg8s binding leads to significant accumulation of ribosomal proteins and rRNA, while Atg1-mediated Rpl12 phosphorylation enhances its association with Atg11, thus triggering ribophagy during starvation. Ribophagy deficiency accelerates cell death induced by starvation and pathogen infection, leading to impaired growth and development and a shortened lifespan in both Caenorhabditis elegans and Drosophila melanogaster. Moreover, ribophagy deficiency results in motor impairments associated with ageing, while the overexpression of RPL12 significantly improves movement defects induced by starvation, ageing and Aβ accumulation in fly models. Our findings suggest that Rpl12 functions as a conserved ribophagy receptor vital for ribosome metabolism and cellular homeostasis.

Indexed as

AutophagyCaenorhabditis elegansCaenorhabditis elegans ProteinsRibosomal ProteinsRibosomesAnimalsAutophagy-Related ProteinsDrosophila melanogasterDrosophila ProteinsHumansLongevityPhosphorylationRNA, RibosomalAutophagy-Related ProteinsCaenorhabditis elegans ProteinsDrosophila ProteinsRibosomal ProteinsRNA, Ribosomal

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.