Evidence map›Paper›PMID 39934219›Full record

ArticleScientific reports2025

A comparative study of antibiotic resistance patterns in Mycobacterium tuberculosis.

Mohammadali Serajian, Conrad Testagrose, Mattia Prosperi, Christina Boucher

Abstract readComparative Study
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Microbiology (Reading, England) · 2026
    Article
  3. bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. AJournal of bacteriology · 2025
    Article
  6. AI-Powered Spectral Imaging for Virtual Pathology Staining.Bioengineering (Basel, Switzerland) · 2025
    Article
  7. Rapid and Efficient Screening ofDiagnostics (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mohammadali SerajianDepartment of Computer and Information Science and Engineering, University of Florida, 1889 Museum Road, Gainesville, 32611, FL, USA.
Conrad TestagroseDepartment of Computer and Information Science and Engineering, University of Florida, 1889 Museum Road, Gainesville, 32611, FL, USA.
Mattia ProsperiDepartment of Epidemiology, University of Florida, Gainesville, 32603, FL, USA.
Christina BoucherDepartment of Computer and Information Science and Engineering, University of Florida, 1889 Museum Road, Gainesville, 32611, FL, USA. christinaboucher@ufl.edu.

Funding

Developing Computational Methods for Surveillance of Antimicrobial Resistant AgentsR01AI141810 · NIAID · UNIVERSITY OF FLORIDA · PI BOUCHER, CHRISTINA, PROSPERI, MATTIA · 2019 to 2023
$2.1M
NIAID NIH HHS R01 AI141810NSF SCH 2013998
6 · The paper itself

Abstract

This study leverages the Bacterial and Viral Bioinformatics Resource Center (BV-BRC) to analyze over 27,000 Mycobacterium tuberculosis (MTB) genomic strains, providing a comprehensive and large-scale overview of antibiotic resistance (AMR) prevalence and resistance patterns. We used MTB++, which is the newest and most comprehensive AI-based MTB drug resistance profiler tool, to predict the resistance profile of each of the 27,000 MTB isolates and then used feature analysis to identify key genes that were associated with the resistance. There are three main contributions to this study. Firstly, it provides a detailed picture of the prevalence of specific AMR genes in the BV-BRC dataset as well as their biological implications, providing critical insight into MTB's resistance mechanisms that can help identify genes of high priority for further investigation. The second aspect of this study is to compare the prevalence of antibiotic resistance across previous studies that have addressed both the temporal and geographical evolution of MTB drug resistance. Lastly, this study emphasizes the need for targeted diagnostics and personalized treatment plans. In addition to these contributions, the study acknowledges the limitations of computational prediction and recommends future experimental validation.

Indexed as

Antitubercular AgentsDrug Resistance, BacterialMycobacterium tuberculosisComputational BiologyHumansMicrobial Sensitivity TestsAntitubercular Agents

Identifiers

PMID39934219
PMCPMC11814411

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.