Evidence map›Paper›PMID 39933823›Full record

ArticleLupus science & medicine2025

Rare and common single nucleotide variants in childhood-onset systemic lupus erythematosus.

Ahmed Sayadi, Johanna K Sandling, Maija-Leena Eloranta, ImmunoArray Development Consortium, DISSECT Consortium, Andreas Jönsen, Iva Gunnarsson, Solbritt Rantapää-Dahlqvist, Christopher Sjöwall, Anders A Bengtsson and 5 more

Abstract read
In one paragraph

Article in Lupus science & medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ahmed SayadiDepartment of Medical Sciences, Rheumatology, Uppsala University, Uppsala, Sweden.
Johanna K SandlingDepartment of Medical Sciences, Rheumatology, Uppsala University, Uppsala, Sweden.
Maija-Leena ElorantaDepartment of Medical Sciences, Rheumatology, Uppsala University, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-8454-1351
ImmunoArray Development Consortium
DISSECT Consortium
Andreas JönsenDepartment of Rheumatology, Clinical Sciences Lund, Lunds Universitet, Lund, Sweden.
Iva GunnarssonDepartment of Medicine, Karolinska Institutet, Stockholm, Sweden.
Solbritt Rantapää-DahlqvistDepartment of Public Health and Clinical Medicine/Rheumatology, Umeå University, Umeå, Sweden.ORCID http://orcid.org/0000-0001-8259-3863
Christopher SjöwallDepartment of Biomedical and Clinical Sciences, Division of Inflammation and Infection/Rheumatology, Linköping University, Linköping, Sweden.ORCID http://orcid.org/0000-0003-0900-2048
Anders A BengtssonDepartment of Rheumatology, Clinical Sciences Lund, Lunds Universitet, Lund, Sweden.
Elisabet SvenungssonDepartment of Medicine, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-3396-3244
Kerstin Lindblad-TohDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Dag LeonardDepartment of Medical Sciences, Rheumatology, Uppsala University, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-6275-7282
Lars RönnblomDepartment of Medical Sciences, Rheumatology, Uppsala University, Uppsala, Sweden lars.ronnblom@medsci.uu.se.ORCID http://orcid.org/0000-0001-9403-6503
DISSECT Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSLE is a systemic autoimmune disease with a large number of common risk gene variants, but several rare gene variants can cause monogenic SLE. The relationship between common and rare variants in SLE is unclear. We therefore investigated the occurrence of rare deleterious variants in patients with childhood-onset SLE (cSLE) and adult-onset SLE (aSLE) and compared the frequency of these variants with their individual SLE polygenic risk score (PRS). MATERIALS AND

methodsTargeted sequencing of 1832 gene regions, including coding regions of 31 genes associated with monogenic SLE, was performed in 958 patients with SLE and 1026 healthy individuals. A total of 116 patients with SLE had disease onset before the age of 18 (cSLE). An SLE common variant PRS was created from 37 SLE genome-wide association study single nucleotide variants (SNVs).

resultsRare coding deleterious SNVs (RD SNVs) were observed in 23 of the monogenic SLE-associated genes. Six per cent of patients with cSLE, compared with 3.2% of controls and 4.6% of patients with aSLE, carried rare deleterious alleles. In cSLE, RD SNVs were observed in the

conclusionRD SNVs were observed in a small proportion of cSLE and carriers of these RD SNVs had a PRS similar to healthy individuals, suggesting the importance of rare coding heterozygous variants in driving disease risk in a subset of children with SLE.

Indexed as

Lupus Erythematosus, SystemicPolymorphism, Single NucleotideAdolescentAdultAge of OnsetCase-Control StudiesChildFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleYoung AdultPolymorphism, GeneticRisk FactorsSystemic Lupus Erythematosus

Identifiers

PMID39933823
PMCPMC11815458

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.