Evidence map›Paper›PMID 39931028›Full record

ArticleGigaScience2025

High-quality phenotypic and genotypic dataset of barley genebank core collection to unlock untapped genetic diversity.

Zhihui Yuan, Maximilian Rembe, Martin Mascher, Nils Stein, Axel Himmelbach, Murukarthick Jayakodi, Andreas Börner, Klaus Oldach, Ahmed Jahoor, Jens Due Jensen and 9 more

Abstract read
In one paragraph

Article in GigaScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Targeted expansion of a barley genebank core collection facilitates the discovery of disease resistance loci.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Zhihui YuanLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0001-9270-0036
Maximilian RembeLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Martin MascherLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0001-6373-6013
Nils SteinLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0003-3011-8731
Axel HimmelbachLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0001-7338-0946
Murukarthick JayakodiLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0003-2951-0541
Andreas BörnerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0003-3301-9026
Klaus OldachKWS LOCHOW GmbH, 29303 Bergen, Germany.ORCID 0000-0002-7114-2650
Ahmed JahoorNordic Seed Germany GmbH, 31688 Nienstädt, Germany.ORCID 0009-0001-8747-4262
Jens Due JensenNordic Seed Germany GmbH, 31688 Nienstädt, Germany.
Julia RudloffLimagrain GmbH, 31226 Peine-Rosenthal, Germany.
Viktoria-Elisabeth DohrendorfNordsaat Saatzucht GmbH, Zuchtstation Gudow, D-23899 Gudow, Germany.
Luisa Pauline KuhfusSyngenta France SAS, 31790, Saint-Sauveur, France.
Emmanuelle DyrszkaSyngenta France SAS, 31790, Saint-Sauveur, France.
Matthieu ConteSyngenta France SAS, 31790, Saint-Sauveur, France.
Frederik HinzSaatzucht Bauer GmbH & CO.KG, 93083 Obertraubling, Germany.
Salim TrouchaudSecobra Saatzucht GmbH, 85368 Moosburg an der Isar, Germany.
Jochen C ReifLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0002-6742-265X
Samira El HanafiLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.ORCID 0000-0002-1445-9723

Funding

German Ministry of Food and Agriculture 031B0190A
6 · The paper itself

Abstract

backgroundGenebanks around the globe serve as valuable repositories of genetic diversity, offering not only access to a broad spectrum of plant material but also critical resources for enhancing crop resilience, advancing scientific research, and supporting global food security. To this end, traditional genebanks are evolving into biodigital resource centers where the integration of phenotypic and genotypic data for accessions can drive more informed decision-making, optimize resource allocation, and unlock new opportunities for plant breeding and research. However, the curation and availability of interoperable phenotypic and genotypic data for genebank accessions is still in its infancy and represents an obstacle to rapid scientific discoveries in this field. Therefore, effectively promoting FAIR (i.e., findable, accessible, interoperable, and reusable) access to these data is vital for maximizing the potential of genebanks and driving progress in agricultural innovation.

findingsHere we provide whole genome sequencing data of 812 barley (Hordeum vulgare L.) plant genetic resources and 298 European elite materials released between 1949 and 2021, as well as the phenotypic data for 4 disease resistance traits and 3 agronomic traits. The robustness of the investigated traits and the interoperability of genomic and phenotypic data were assessed in the current publication, aiming to make this panel publicly available as a resource for future genetic research in barley.

conclusionsThe data showed broad phenotypic variability and high association mapping potential, offering a key resource for identifying genebank donors with untapped genes to advance barley breeding while safeguarding genetic diversity.

Indexed as

Databases, GeneticGenetic VariationHordeumDisease ResistanceGenome, PlantGenotypePhenotypePlant BreedingWhole Genome Sequencingagronomic traitsBarleydisease resistanceeliteplant genetic resourceswhole genome resequencing

Identifiers

PMID39931028
PMCPMC11811526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.