Evidence map›Paper›PMID 39930056›Full record

ArticleScientific reports2025

Identification and validation of diagnostic biomarkers for temporal lobe epilepsy related to ferroptosis and potential therapeutic targets.

Dai Shi, Jingxuan Li, Zhenpeng Niu, Likun Wang, Siying Ren, Wen Gu, Hui Yang, Hong Xue, Guofeng Wu

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dai ShiSchool of Basic Medicine, Guizhou Medical University, Guiyang, 561113, China. shidai670@gzy.edu.cn.
Jingxuan LiSchool of Clinical Medicine, Guizhou Medical University, Guiyang, 550004, China.
Zhenpeng NiuSchool of Basic Medicine, Guizhou Medical University, Guiyang, 561113, China.
Likun WangEmergency Department, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Siying RenEmergency Department, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Wen GuDepartment of Endocrinology, The Second Affiliated Hospital of Guizhou University of Traditional Chinese Medicine, Guiyang, 550001, China.
Hui YangDepartment of Neurology, The Second Affiliated Hospital of Guizhou University of Traditional Chinese Medicine, Guiyang, 550001, China.
Hong XueDepartment of Neurology, The Second Affiliated Hospital of Guizhou University of Traditional Chinese Medicine, Guiyang, 550001, China.
Guofeng WuSchool of Basic Medicine, Guizhou Medical University, Guiyang, 561113, China. wuguofeng3013@sina.com.

Funding

Foundation for Innovative Research Groups of the National Natural Science Foundation of China 82001380General Fund Cultivation Program of National Natural Science Foundation of Guizhou Medical University Affiliated Hospital gyfynsfc-2021-8Guizhou Provincial Science and Technology Projects Qiankehe platform talent general 2021-5612
6 · The paper itself

Abstract

Ferroptosis pathway activation is potentially correlated with temporal lobe epilepsy (TLE). However, the diagnostic significance and mechanism of ferroptosis-related genes (FRGs) in TLE require further investigation. A comprehensive analysis of the GSE134697 dataset from the Gene Expression Omnibus (GEO) database using Weighted gene co-expression network analysis (WGCNA) identified 3,212 differentially expressed genes (DEGs) between temporal lobe epilepsy (TLE) and control groups, with a critical focus on the turquoise module. Through intersection of DEGs and key module genes, correlation analyses with functional-related genes (FRG), protein-protein interactions (PPI), least absolute shrinkage and selection operator (LASSO), and machine learning methods, five potential biomarkers of ferroptosis (CBS, SHMT1, RIN3, QDPR, and PLPP4) were isolated. A nomogram was constructed using these markers, and enrichment analyses revealed their links to T-cell activation, allograft rejection, and glial differentiation. Variations in 13 immune cell types were also noted. Upregulation of CBS, RIN3, QDPR, and PLPP4 in TLE was confirmed through RT-qPCR and Western blot assays. Additionally, five SHMT1-targeting and one CBS-targeting drugs were predicted using the Drug-Gene Interaction Database (DGIdb). These findings provide new insights into the potential pathogenesis of TLE and suggest new targets for future research.

Indexed as

BiomarkersEpilepsy, Temporal LobeFerroptosisDatabases, GeneticGene Expression ProfilingGene Regulatory NetworksHumansProtein Interaction MapsBiomarkersBioinformaticsBiomarkersFerroptosis-related genesImmune cell infiltrationTemporal lobe epilepsy

Identifiers

PMID39930056
PMCPMC11811202

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.