Evidence map›Paper›PMID 39926474›Full record

ArticleOpen life sciences2025

Optimizing a modified cetyltrimethylammonium bromide protocol for fungal DNA extraction: Insights from multilocus gene amplification.

Gulam Jeelani Dar, Ruqeya Nazir, Shakil A Wani, Saleem Farooq, Tariq Aziz, Thamer H Albekairi

Abstract read
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Article in Open life sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gulam Jeelani DarCentre of Research for Development (CORD), University of Kashmir, Srinagar 190006, Jammu and Kashmir, India.
Ruqeya NazirCentre of Research for Development (CORD), University of Kashmir, Srinagar 190006, Jammu and Kashmir, India.
Shakil A WaniBacteriology Laboratory, Division of Veterinary Microbiology & Immunology, SK University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Saleem FarooqCentre of Research for Development (CORD), University of Kashmir, Srinagar 190006, Jammu and Kashmir, India.
Tariq AzizLaboratory of Animal Health, Food Hygiene and Quality, University of Ioannina, Ioannina, Greece.
Thamer H AlbekairiDepartment of Pharmacology and Toxicology, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic DNA (gDNA) extraction is an important step in many molecular studies of fungal biology, and it is necessary to evaluate the efficiency, cost-effectiveness, and efficacy of different extraction methods to ensure successful amplification of the target gene and minimize deoxyribonucleic acid (DNA) degradation. The modified cetyltrimethylammonium bromide (CTAB) method was found to be effective in releasing high molecular weight gDNA with minimal protein contamination. Based on anticipated gDNA yield and quality, extraction time, cost effectiveness, successful amplification, and waste management, our findings serve as a guide for selecting techniques of gDNA extraction from fungal species. This study presents a modified CTAB method for extracting DNA from a variety of fungal species including

Indexed as

CTABgene locigenomic DNAITSMLSTPCR

Identifiers

PMID39926474
PMCPMC11806203

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.