Evidence map›Paper›PMID 39926379›Full record

ArticleCellular and molecular bioengineering2024

A Multicellular Mechanochemical Model to Investigate Tumor Microenvironment Remodeling and Pre-Metastatic Niche Formation.

Shreyas U Hirway, Kylie G Nairon, Aleksander Skardal, Seth H Weinberg

Abstract read
In one paragraph

Article in Cellular and molecular bioengineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shreyas U HirwayDepartment of Biomedical Engineering, The Ohio State University, Columbus, OH USA.
Kylie G NaironDepartment of Biomedical Engineering, The Ohio State University, Columbus, OH USA.
Aleksander SkardalDepartment of Biomedical Engineering, The Ohio State University, Columbus, OH USA.
Seth H WeinbergDepartment of Biomedical Engineering, The Ohio State University, Columbus, OH USA.ORCID 0000-0003-1170-0419

Funding

A Computational Model of Traction Force-Induced Fibronectin Fibril GrowthR01GM115678 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI LEMMON, CHRISTOPHER ANDREW, WEINBERG, SETH HOWARD · 2015 to 2019
$1.6M
Mechanochemical Signaling Dynamics in Epithelial-Mesenchymal TransitionR01GM122855 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI LEMMON, CHRISTOPHER ANDREW, WEINBERG, SETH HOWARD · 2018 to 2021
$1.2M
Predicting Tumor Heterogeneity Evolution After Therapy In Patient-Derived Ex Vivo Glioblastoma OrganoidsR21CA229027 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SKARDAL, ALEKSANDER, STROWD, ROY ERVIN · 2018 to 2019
$597k
Ex vivo generation of tumor-reactive T cells for adoptive cell transfer using an immune enhanced, patient derived tumor organoid-on-a-chip (iTOC)R21CA263137 · NCI · OHIO STATE UNIVERSITY · PI BEANE, JOAL D, SKARDAL, ALEKSANDER · 2022 to 2023
$396k
NCI NIH HHS R21 CA229027NCI NIH HHS R21 CA263137NIGMS NIH HHS R01 GM115678NIGMS NIH HHS R01 GM122855
6 · The paper itself

Abstract

Introduction: Colorectal cancer (CRC) is a major cause of cancer related deaths in the United States, with CRC metastasis to the liver being a common occurrence. The development of an optimal metastatic environment is essential process prior to tumor metastasis. This process, called pre-metastatic niche (PMN) formation, involves activation of key resident liver cells, including fibroblast-like stellate cells and macrophages such as Kupffer cells. Tumor-mediated factors introduced to this environment transform resident cells that secrete additional growth factors and remodel the extracellular matrix (ECM), which is thought to promote tumor colonization and metastasis in the secondary environment. Methods: To investigate the underlying mechanisms of these dynamics, we developed a multicellular computational model to characterize the spatiotemporal dynamics of the PMN formation in tissue. This modeling framework integrates intracellular and extracellular signaling, and traction and junctional forces into a Cellular Potts model, and represents multiple cell types with varying levels of cellular activation. We perform numerical experiments to investigate the role of key factors in PMN formation and tumor invasiveness, including growth factor concentration, timing of tumor arrival, relative composition of resident cells, and the size of invading tumor cluster. Results: These parameter studies identified growth factor availability and ECM concentration in the environment as two of the key determinants of tumor invasiveness. We further predict that both the ECM concentration potential and growth factor sensitivity of the stellate cells are key drivers of the PMN formation and associated ECM concentration. Conclusions: Overall, this modeling framework represents a significant step towards simulating cancer metastasis and investigating the role of key factors on PMN formation. Supplementary Information: The online version contains supplementary material available at 10.1007/s12195-024-00831-0.

Indexed as

CancerCellular-potts modelComputational modelingEpithelial-mesenchymal transitionKupffer cellsPre-metastatic nicheStellate cellsTumor cells

Identifiers

PMID39926379
PMCPMC11799507

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.