Evidence map›Paper›PMID 39922850›Full record

ArticleScientific reports2025

Whole genome re-sequencing in 437 tobacco germplasms identifies plant height candidate genes.

Yanru Song, Yuanheng Wang, Ying Liu, Haozhen Li, Jie Ding, Xingfu Wu, Yongping Li, Fangchan Jiao, Long Yang

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yanru Song *Yunnan Academy of Tobacco Agricultural Sciences, Kunming, China.
Yuanheng Wang *College of Plant Protection and Agricultural Big-Data Research Center, Shandong Agricultural University, Tai'an, China.
Ying LiuCollege of Plant Protection and Agricultural Big-Data Research Center, Shandong Agricultural University, Tai'an, China.
Haozhen LiCollege of Plant Protection and Agricultural Big-Data Research Center, Shandong Agricultural University, Tai'an, China.
Jie DingCollege of Plant Protection and Agricultural Big-Data Research Center, Shandong Agricultural University, Tai'an, China.
Xingfu WuYunnan Academy of Tobacco Agricultural Sciences, Kunming, China.
Yongping LiYunnan Academy of Tobacco Agricultural Sciences, Kunming, China.
Fangchan JiaoYunnan Academy of Tobacco Agricultural Sciences, Kunming, China. jfc99002@163.com.
Long YangCollege of Plant Protection and Agricultural Big-Data Research Center, Shandong Agricultural University, Tai'an, China. lyang@sdau.edu.cn.

Funding

the Foundation of Innovation Team Project for Modern Agricultural Industrious Technology System of Shandong Province SDAIT-25-01the platform construction for tobacco genome breeding 2017YN05
6 · The paper itself

Abstract

Tobacco is one of the most important model plants. Plant height is one of the most important agronomic traits in tobacco. To better understand the population genetic structure and the genetic basis of plant height in tobacco, 437 tobacco germplasms were whole genome re-sequencing in this study. A total of 2,263,775 high-quality single nucleotide polymorphisms were identified. The analysis of the population genetic structure showed that tobacco germplasm could be divided into 8 clusters. In addition, gene flow was found between flue-cured tobacco and ustic tobacco, as well as between oriental tobacco and air-cured tobacco. Three genes associated with plant height were identified as candidate genes by genome-wide association study. This study provides valuable genetic resources for population structure analysis and elucidation of the genetic basis of various traits. It helps to improve the efficiency of molecular breeding.

Indexed as

Genes, PlantGenome, PlantNicotianaWhole Genome SequencingGenome-Wide Association StudyPlant BreedingPolymorphism, Single NucleotideGenetic structureGWASPlant heightTobaccoWGRS

Identifiers

PMID39922850
PMCPMC11807208

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.