Evidence map›Paper›PMID 39920798›Full record

ArticleEuropean journal of medical research2025

Inhibition of complement system-related gene ITGB2 attenuates epithelial-mesenchymal transition and inflammation in diabetic nephropathy.

Jun Peng, Wenqi Zhao, Lu Zhou, Kun Ding

Abstract read
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Article in European journal of medical research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jun PengNephrology Department, Central Theater Command General Hospital of the Chinese People's Liberation Army, No.627, Wuluolu, Wuchang District, Wuhan, 430070, Hubei, China. 30832644@qq.com.
Wenqi ZhaoNephrology Department, Central Theater Command General Hospital of the Chinese People's Liberation Army, No.627, Wuluolu, Wuchang District, Wuhan, 430070, Hubei, China.
Lu ZhouNephrology Department, Central Theater Command General Hospital of the Chinese People's Liberation Army, No.627, Wuluolu, Wuchang District, Wuhan, 430070, Hubei, China.
Kun DingNephrology Department, Central Theater Command General Hospital of the Chinese People's Liberation Army, No.627, Wuluolu, Wuchang District, Wuhan, 430070, Hubei, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeEmerging evidences have indicated a role of the complement system in the pathogenesis of diabetic nephropathy (DN). Thus, this study was conducted to explore the complement system-related key biomarkers for patients with DN.

methodsDN microarray datasets were downloaded from the GEO database, followed by differentially expressed genes (DEGs) screening. Complement system-related genes (CSRGs) were searched from various databases. Weighted Gene Co-expression Network Analysis (WGCNA) was employed to screen the DN-related genes, then the differential CSRGs (DCSRGs) were identified, followed by protein-protein interaction (PPI) network construction. In addition, key biomarkers were acquired by two machine learning algorithms, then immune infiltration analysis, Gene Set Enrichment Analysis (GSEA), and potential drugs screening were conducted. Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) and western blotting were utilized to detect the ITGB2 expression. Then the cell viability, inflammatory factors, and the expression of epithelial-mesenchymal transition (EMT) and fibrosis markers were determined by using Cell Counting Kit-8 (CCK-8) assay, enzyme linked immunosorbent assay (ELISA), western blotting assays, respectively.

resultsIn total, 1012 DEGs and 974 DN-related genes were screened, and intersection analysis of the three (DN-related genes, DEGs and CSRGs) yielded 13 intersection genes, which were considered as the DCSRGs. Subsequently, 2 key biomarkers were identified by machine learning, namely VWF and ITGB2. The VWF and ITGB2 were both enriched in the pathways of chemokine signaling pathway, CAMs, focal adhesion and natural killer cell-mediated cytotoxicity, and significantly correlated with the activated mast cells, resting NK cells, and macrophages. Also, VWF and ITGB2 were significantly related to the clinical features, including age, serum creatinine level, and GFR (MDRD). Besides, mRNA and protein expression levels of ITGB2 in HG-treated HK-2 cells were remarkably elevated. Moreover, the viability of HK-2 cells, expression of TNF-α, IL-6, IL-12, α-SMA, E-cadherin and vimentin in HK-2 cells changed by HG administration were reversed by ITGB2-silence.

conclusionComplement system-related gene ITGB2 was overexpressed in DN, and inhibition of ITGB2 attenuated EMT and inflammation in DN.

Indexed as

Complement System ProteinsDiabetic NeuropathiesInflammationIntegrin beta ChainsKidney TubulesBiomarkersCell LineEpithelial-Mesenchymal TransitionGene Expression ProfilingGene Regulatory NetworksHealthy VolunteersHumansMachine LearningReverse Transcriptase Polymerase Chain Reactionvon Willebrand FactorBiomarkersComplement System ProteinsIntegrin beta ChainsITGB2 protein, humanvon Willebrand FactorComplement systemDiabetic nephropathyImmune infiltrationMachine learningWeighted correlation network analysis

Identifiers

PMID39920798
PMCPMC11806615

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.