Evidence map›Paper›PMID 39913417›Full record

ArticlePloS one2025

Prevalence and antibiotic resistance of Escherichia coli in urban and peri-urban garden ecosystems in Bangladesh.

Pritom Kumar Pramanik, M Nazmul Hoque, Md Liton Rana, Md Saiful Islam, Md Ashek Ullah, Fahim Haque Neloy, Srinivasan Ramasamy, Pepijn Schreinemachers, Ricardo Oliva, Md Tanvir Rahman

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Occurrence of Phenotypic Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2026
    Article
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  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Pritom Kumar PramanikFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.
M Nazmul HoqueDepartment of Gynecology, Molecular Biology and Bioinformatics Laboratory, Obstetrics and Reproductive Health, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh.ORCID https://orcid.org/0000-0002-4861-0030
Md Liton RanaFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.ORCID https://orcid.org/0000-0003-1400-1250
Md Saiful IslamFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.ORCID https://orcid.org/0000-0002-6870-4595
Md Ashek UllahFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Fahim Haque NeloyFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Srinivasan RamasamyWorld Vegetable Center, Shanhua, Taiwan.
Pepijn SchreinemachersWorld Vegetable Center, Bangkok, Thailand.ORCID https://orcid.org/0000-0003-1596-3179
Ricardo OlivaWorld Vegetable Center, Shanhua, Taiwan.
Md Tanvir RahmanFaculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.ORCID https://orcid.org/0000-0001-5432-480X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the past decade, there has been a notable rise in foodborne outbreaks, prominently featuring Escherichia coli as a primary pathogen. This bacterium, known for its prevalence in foodborne illnesses and as a reservoir of antimicrobial resistance, was isolated from raw vegetables, soil, and water samples collected from rooftop and surface gardens in urban (Dhaka North City Corporation; DNCC and Dhaka South City Corporation; DSCC) and peri-urban (Gazipur City Corporation; GCC) areas of Bangladesh. In this study, 145 samples including vegetables (n = 88), water (n = 27) and soils (n = 30) from DNCC (n = 85), DSCC (n = 30), and GCC (n = 30) were analyzed to assess the prevalence of E. coli using culture, biochemical tests, and PCR targeting the malB gene. E. coli was detected in 85 samples, indicating an overall prevalence of 58.62% (95% CI: 50.48-66.31). In urban areas (DNCC and DSCC), the prevalence rates were 44.70% and 80.0%, respectively, with surface gardens showing higher contamination rates (70.83%) than rooftop gardens (46.57%). In the peri-urban GCC, overall prevalence of E. coli was 76.7%, with rooftop gardens more contaminated (93.33%) than surface gardens (60.0%). Antibiogram profiling of 54 randomly selected isolates revealed 100% resistance to ampicillin, with varying resistance to ciprofloxacin (25.92%), tetracycline (14.81%), cotrimoxazole (14.81%), imipenem (9.25%), and fosfomycin (1.0%). Notably, all isolates were susceptible to ceftazidime, gentamicin, chloramphenicol, nitrofurantoin, and cefotaxime. Multidrug resistance (MDR) was found in 14.81% of isolates. The blaTEM gene was present in 81.48% of the isolates, while the tetA gene was detected in 3.70%. These findings underscore the urgent global health concern posed by the significant presence of E. coli in fresh vegetables, highlighting the need for improved safety measures and monitoring to prevent the spread of antimicrobial resistance through the food chain.

Indexed as

Drug Resistance, BacterialEscherichia coliGardensAnti-Bacterial AgentsBangladeshCitiesEcosystemHumansMicrobial Sensitivity TestsPrevalenceSoil MicrobiologyVegetablesAnti-Bacterial Agents

Identifiers

PMID39913417
PMCPMC11801607

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.