Evidence map›Paper›PMID 39911270›Full record

ArticleData in brief2025

GBM-Reservoir: Brain tumor (Glioblastoma Multiforme) MRI dataset collection with ground truth segmentation masks.

Naida Solak, André Ferreira, Gijs Luijten, Behrus Puladi, Victor Alves, Jan Egger

Abstract read
In one paragraph

Article in Data in brief, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Naida SolakGraz University of Technology (TU Graz), Graz, Styria, Austria.
André FerreiraInstitute for AI in Medicine (IKIM), University Hospital Essen (UKE), Ruhrgebiet, Essen, Germany.
Gijs LuijtenGraz University of Technology (TU Graz), Graz, Styria, Austria.
Behrus PuladiInstitute of Medical Informatics, University Hospital RWTH Aachen, Aachen, Germany.
Victor AlvesCenter Algoritmi / LASI, University of Minho, Braga, Portugal.
Jan EggerGraz University of Technology (TU Graz), Graz, Styria, Austria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this article, we present a brain tumor database collection comprising 23,049 samples, with each sample including four different types of MRI brain scans: FLAIR, T1, T1ce, and T2. Additionally, one or two segmentation masks (ground truth) are provided for each sample. The first mask is the raw output from the registration process and is provided for all samples, while the second mask, provided particularly for synthetic samples, is a post-processed version of the first, designed to simplify interpretation and optimize it for network training. These samples have been acquired via registration process of 438 samples available at the moment of registration from the original dataset provided by the BraTS 2022 Challenge. Registering each pair of existing brain scans results in two additional scans that retain a similar brain shape while featuring varying tumor locations. Consequently, by registering all possible pairs, a dataset originally consisting of n samples can be expanded to n

Indexed as

Brain tumor segmentationBraTSData augmentationDeep learningRegistration

Identifiers

PMID39911270
PMCPMC11795548

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.