Evidence map›Paper›PMID 39910293›Full record

ArticleNature2025

SKI complex loss renders 9p21.3-deleted or MSI-H cancers dependent on PELO.

Patricia C Borck, Isabella Boyle, Kristina Jankovic, Nolan Bick, Kyla Foster, Anthony C Lau, Lucy I Parker-Burns, Daniel A Lubicki, Tianxia Li, Ashir A Borah and 14 more

Abstract read
In one paragraph

Article in Nature, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Comprehensive Genomic and Transcriptomic Characterization of MTAP Loss across Advanced Solid Tumors.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Observational
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Interferon Epsilon Loss Is Elusive 9p21 Link to Immune-Cold Tumors, Resistant to Immune Checkpoint Therapy, and Endogenous CXCL9/10 Induction.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2025
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Patricia C BorckBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Isabella BoyleBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-8138-1225
Kristina JankovicHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.
Nolan BickBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-8963-7304
Kyla FosterBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Anthony C LauBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Lucy I Parker-BurnsHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.
Daniel A LubickiBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Tianxia LiHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.
Ashir A BorahBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Nicholas J LofasoHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.ORCID 0009-0002-5065-0565
Sohani Das SharmaHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.
Tessla ChanHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.
Riya V KishenHerbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY, USA.ORCID 0009-0000-3839-7267
Anisah AdeagboBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Srivatsan RaghavanBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-5374-9918
Elisa AquilantiBroad Institute of MIT and Harvard, Cambridge, MA, USA.
John R PrensnerBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-7024-636X
J Michael Krill-BurgerBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-9614-4671
Todd R GolubBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0003-0113-2403
Catarina D CampbellBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Joshua M DempsterBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-3634-9576
Edmond M Chan *Broad Institute of MIT and Harvard, Cambridge, MA, USA. emc2291@cumc.columbia.edu.ORCID 0000-0002-7460-2560
Francisca Vazquez *Broad Institute of MIT and Harvard, Cambridge, MA, USA. vazquez@broadinstitute.org.ORCID 0000-0002-2857-4685

Funding

The Dana-Farber Cancer Institute Cancer Target Discovery and Development CenterU01CA176058 · NCI · DANA-FARBER CANCER INST · PI HAHN, WILLIAM C. · 2013 to 2021
$7.8M
Development and implementation of multiplex methods to understand the biology and heterogeneity of patient-derived cancer modelsU01CA250549 · NCI · DANA-FARBER CANCER INST · PI HAHN, WILLIAM C. · 2020 to 2022
$2.9M
Regulation and targeting of tumor cell states and plasticity in pancreatic cancerK08CA260442 · NCI · DANA-FARBER CANCER INST · PI Srivatsan Raghavan · 2022 to 2026
$1.5M
Deciphering non-canonical translation in high risk medulloblastomaK08CA263552 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI John Prensner · 2022 to 2026
$1.2M
Advancing WRN as a synthetic lethal target for microsatellite unstable CancersK08CA256173 · NCI · DANA-FARBER CANCER INST · PI CHAN, EDMOND · 2021 to 2025
$1.1M
NCI NIH HHS K08 CA256173NCI NIH HHS K08 CA260442NCI NIH HHS K08 CA263552NCI NIH HHS U01 CA176058NCI NIH HHS U01 CA250549
6 · The paper itself

Abstract

Cancer genome alterations often lead to vulnerabilities that can be used to selectively target cancer cells. Various inhibitors of such synthetic lethal targets have been approved by the FDA or are in clinical trials, highlighting the potential of this approach

Indexed as

Chromosome DeletionChromosomes, Human, Pair 9Microsatellite InstabilityNeoplasmsAllelesCell Line, TumorGene DeletionHumansRibosomesRNA, MessengerSynthetic Lethal MutationsUnfolded Protein ResponseRNA, Messenger

Identifiers

PMID39910293
PMCPMC11864980

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.