Evidence map›Paper›PMID 39910141›Full record

ArticleScientific reports2025

Identification of m6A methyltransferase-related WTAP and ZC3H13 predicts immune infiltrates in glioblastoma.

Liyun Gao, Jiaxin Gao, Jiayin He, Wenyan Fan, Xiangxin Che, Xin Wang, Tao Wang, Chunhua Han

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Epitranscriptomic silencing of the ZC3H13/mJournal of experimental & clinical cancer research : CR · 2026
    Article
  2. Review
  3. The mMolecular biomedicine · 2025
    Review
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Liyun GaoCenter for Cognitive Science and Transdisciplinary Studies, Jiujiang University, Jiujiang, China. gaoliyun813@126.com.
Jiaxin GaoSchool of Nursing and Health Management, Wuhan Donghu University, Wuhan, China.
Jiayin HeSchool of Literature and Journalism, South-central Minzu University, Wuhan, China.
Wenyan FanDepartment of Preventive Medicine, School of Basic Medicine, Jiujiang University, Jiujiang, China.
Xiangxin CheDepartment of Preventive Medicine, School of Basic Medicine, Jiujiang University, Jiujiang, China.
Xin WangDepartment of Preventive Medicine, School of Basic Medicine, Jiujiang University, Jiujiang, China.
Tao WangDepartment of Preventive Medicine, School of Basic Medicine, Jiujiang University, Jiujiang, China.
Chunhua HanCare Medicine, Jiujiang First People's Hospital, 48 South Taring Road, Jiujiang, 332005, China. 642300931@qq.com.

Funding

Department of Science and Technology of Hubei Province with the Project 2022BCE045Future project of Jiujiang administration of traditional Chinese medicine 2021b697Innovation and Entrepreneurship Training Program for College Students 202311843003, S202411843047Jiangxi Natural Science Foundation Project 20202BAB206067, 20232BAB206141Jiujiang base and talent plan - high level scientific and technological innovation talent project (S2020QNZZ011, S2024ZDYFN0023Key research and development project of Jiujiang City, Jiangxi Province S2024ZDYFN0014 and S2024ZDYF0023National Natural Science Foundation of China 81502843, 81360447Science and Technology Plan Project of Jiangxi Provincial Health Commission SKJP220225877, 202311158Special Research Project of Jiangxi Cognitive Science and Interdisciplinary Research Center RZYB202206Talent Introduction Projects of Hubei Polytechnic University 22xjz16RXuncheng Talents project in Jiujiang City, Jiangxi Province JJXC2023071
6 · The paper itself

Abstract

Glioblastoma (GBM) is a prevalent and highly fatal primary malignant brain tumor. N6-methyladenosine (m6A) modification plays a critical role in the development of brain tumor. WTAP and ZC3H13 have been identified across various species. Immune contexture, which includes the tumor microenvironment (TME), plays a significant role in cancer progression and treatment. This study aimed to explore the potential impact between WTAP and ZC3H13 on the immunological characteristics of GBM. We utilized data from TCGA-GBM, GEO and CGGA datasets to obtain platform and probe data. Patients with GBM were stratified into two clusters based on the expression of WTAP and ZC3H13 using consensus clustering approach. Immune infiltration within the tumor microenvironment was assessed using ESTIMATE, CIBERSORT and ssGSEA methodologies. Functional disparities were determined through gene set enrichment analysis (GSEA). Tumor mutation burden (TMB) and immune checkpoint inhibitors (ICIs) were also analyzed. Co-expression network analysis (WGCNA) was used to identify genes associated with WTAP/ZC3H13 and immunity. Validation was performed using GEO and CGGA datasets. Our analysis revealed that cluster1 exhibited higher WTAP expression but lower ZC3H13 expression compared to cluster2. Cluster1 showed higher levels of immune infiltration and TMB compared to cluster2. WGCNA identified 15 genes closely associated with WTAP/ZC3H13 expression and immune scores, notably CTLA4, CD27, ICOS, and LAG3. Our results suggested that WTAP and ZC3H13 influence on immune contexture of GBM, providing new insights into tumor immunity in GBM.

Indexed as

Brain NeoplasmsCell Cycle ProteinsGlioblastomaMethyltransferasesAdenosineBiomarkers, TumorGene Expression Regulation, NeoplasticHumansRNA Splicing FactorsTumor MicroenvironmentAdenosineBiomarkers, TumorCell Cycle ProteinsMethyltransferasesN-methyladenosineRNA Splicing FactorsWTAP protein, humanGlioblastomaImmune contexturem6A modificationWTAPZC3H13

Identifiers

PMID39910141
PMCPMC11799344

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.