Evidence map›Paper›PMID 39910036›Full record

ArticleBlood cancer journal2025

Genomic characterization of chronic lymphocytic leukemia in patients of African ancestry.

Cecilia Bonolo de Campos, Chantal E McCabe, Laura A Bruins, Daniel R O'Brien, Sochilt Brown, Renee C Tschumper, Cristine Allmer, Yuan Xiao Zhu, Kari G Rabe, Sameer A Parikh and 11 more

Abstract read
In one paragraph

Article in Blood cancer journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Cecilia Bonolo de CamposDivision of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA.
Chantal E McCabeDivision of Computational Biology, Mayo Clinic, Rochester, MN, USA.
Laura A BruinsDivision of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA.
Daniel R O'BrienDivision of Computational Biology, Mayo Clinic, Rochester, MN, USA.
Sochilt BrownDivision of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA.
Renee C TschumperDepartment of Immunology, Mayo Clinic, Rochester, MN, USA.
Cristine AllmerDivision of Clinical Trials and Biostatistics, Mayo Clinic, Rochester, MN, USA.
Yuan Xiao ZhuDivision of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA.
Kari G RabeDivision of Clinical Trials and Biostatistics, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-7313-1875
Sameer A ParikhDivision of Hematology, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-3221-7314
Neil E KayDepartment of Immunology, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-5951-5055
Huihuang YanDivision of Computational Biology, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0003-0756-2922
James R CerhanDivision of Epidemiology, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-7482-178X
John N AllanDivision of Hematology and Medical Oncology, Weill Cornell Medical College, New York, NY, USA.
Richard R FurmanDivision of Hematology and Medical Oncology, Weill Cornell Medical College, New York, NY, USA.ORCID 0000-0003-1677-7626
J Brice WeinbergDivisions of Hematology and Hematologic Malignancies & Cellular Therapy & VA Medical Center, Durham, NC, USA.
Danielle M BranderDivision of Hematologic Malignancy and Cellular Therapy, Duke Cancer Institute, Durham, NC, USA.
Diane F JelinekDepartment of Immunology, Mayo Clinic, Scottsdale, AZ, USA.
Marta ChesiDivision of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA.ORCID 0000-0002-4024-8225
Susan L Slager *Division of Computational Biology, Mayo Clinic, Rochester, MN, USA. Slager.susan@mayo.edu.ORCID 0000-0002-5173-4712
Esteban Braggio *Division of Hematology/Oncology, Mayo Clinic, Phoenix, AZ, USA. Braggio.esteban@mayo.edu.ORCID 0000-0003-3860-4830

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Lila J. Rutten · 1985 to 2026
$151.3M
Germline and Somatic Genomic Studies in CLL MinoritiesR01CA254951 · NCI · MAYO CLINIC ROCHESTER · PI BRAGGIO, ESTEBAN, SLAGER, SUSAN L · 2021 to 2025
$3.3M
Integration of germline and tumor genomes in CLLR01CA235026 · NCI · MAYO CLINIC ROCHESTER · PI BRAGGIO, ESTEBAN, SLAGER, SUSAN L · 2019 to 2023
$3.2M
NCI NIH HHS P30 CA015083NCI NIH HHS R01 CA235026NCI NIH HHS R01 CA254951U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01CA235026U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01CA254951
6 · The paper itself

Abstract

Despite the considerable effort to characterize the genomic landscape of chronic lymphocytic leukemia (CLL), published data have been almost exclusively derived from patients of European Ancestry (EA), with significant underrepresentation of minorities, including patients of African Ancestry (AA). To begin to address this gap, we evaluated whether differences exist in the genetic and transcriptomic features of 157 AA and 440 EA individuals diagnosed with CLL. We sequenced 59 putative driver genes and found an increased frequency of high-impact mutations in AA CLL, including genes of the DNA damage repair (DDR) pathway. Telomere erosion was also increased in AA CLL, amplifying the notion of increased genomic instability in AA CLL. Furthermore, we found transcription enrichment of the Tumor Necrosis Factor-alpha (TNFα) Signaling via NF-κB pathway in AA CLL compared to EA CLL, suggesting that tumor promoting inflammation plays an important role in AA CLL. In summary, these results suggest that genomic instability and NF-kB activation is more prevalent in AA CLL than EA CLL.

Indexed as

Black PeopleLeukemia, Lymphocytic, Chronic, B-CellAgedAged, 80 and overFemaleGenomic InstabilityGenomicsHumansMaleMiddle AgedMutationNF-kappa BWhite PeopleNF-kappa B

Identifiers

PMID39910036
PMCPMC11799526

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.