Evidence map›Paper›PMID 39907826›Full record

ArticlePlant cell reports2025

Essential role of rice ERF101 in the perception of TAL effectors and immune activation mediated by the CC-BED NLR Xa1.

Ayaka Yoshihisa, Satomi Yoshimura, Junwen Zhou, Kei Nishikawa, Koji Yamaguchi, Tsutomu Kawasaki

Abstract read
In one paragraph

Article in Plant cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Quantification of NLR-Induced Cell Death Using Rice Protoplasts.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ayaka YoshihisaDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan.
Satomi YoshimuraDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan.
Junwen ZhouDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan.
Kei NishikawaDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan.
Koji YamaguchiDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan.
Tsutomu KawasakiDepartment of Advanced Bioscience, Graduate School of Agriculture, Kindai University, Nakamachi, Nara, 631-8505, Japan. t-kawasaki@nara.kindai.ac.jp.ORCID http://orcid.org/0000-0003-2579-2000

Funding

Japan Society for the Promotion of Science 19H00945Japan Society for the Promotion of Science 24H00515
6 · The paper itself

Abstract

key messageRice CC-BED NLR Xa1 recognizes TAL effectors through the interaction between ERF101 and TAL effectors. The rice Xa1 gene encodes a nucleotide-binding leucine-rich repeat receptor with an N-terminal coiled coil-zinc finger BED (CC-BED) domain. Xa1 recognizes the transcription activator-like (TAL) effectors of Xanthomonas oryzae pv. oryzae (Xoo) in the nucleus, triggering a number of immune responses, including hypersensitive cell death. We previously discovered that the rice transcription factor ERF101 directly interacts with Xa1, and functions as a positive regulator of Xa1-dependent immunity. However, the involvement of ERF101 in Xa1-induced immunity remains unclear. We herein demonstrated that the expression of the CC-BED domain in rice protoplasts inhibited Xa1-induced cell death. However, the CC-BED

Indexed as

OryzaPlant ImmunityPlant ProteinsTranscription Activator-Like EffectorsCell DeathGene Expression Regulation, PlantPlant DiseasesPlants, Genetically ModifiedProtein DomainsProtoplastsXanthomonasPlant ProteinsTranscription Activator-Like EffectorsBED domainNLRRiceTAL effectorXanthomonas

Identifiers

PMID39907826
PMCPMC11799121

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.