Evidence map›Paper›PMID 39905402›Full record

ArticleBMC musculoskeletal disorders2025

Bioinformatics screening and clinical validation of CircRNA and related miRNA in male osteoporosis.

Jiayi Li, Sijia Guo, Qingyun Sun, Ning An, Jisheng Lin, Qi Fei

Abstract readValidation Study
In one paragraph

Article in BMC musculoskeletal disorders, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Bone Material Properties in Male Idiopathic Osteoporosis.Calcified tissue international · 2025
    Article
  2. Review
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jiayi Li *Department of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China.
Sijia Guo *Department of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China.
Qingyun SunDepartment of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China.
Ning AnDepartment of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China.
Jisheng LinDepartment of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China.
Qi FeiDepartment of Orthopedics, Beijing Friendship Hospital, Capital Medical University, Xicheng District, Beijing, 100050, People's Republic of China. spinefei@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe pathogenesis of male osteoporosis (MOP) remains unclear, with the role of genetic factors attracting the attention of researchers. In the present study, we aimed to investigate critical circRNA biomarkers associated with male osteoporosis.

methodsRNA-sequencing was performed to investigate the circRNA expression profiles between 3 men with osteoporosis and 3 with normal mass density. Then, shared mRNAs between host genes acquired in this present study and mRNAs acquired in previous study were identified to screen vital circRNAs associated with male osteoporosis. PPI networks of shared mRNAs were constructed and the hub genes in the PPI networks were identified with CytoHubba, a plugin in Cytoscape software (3.10.1). Finally, a ceRNA network of four circRNAs derived from three hub genes was constructed. Validation experiments were performed on selected circRNAs and related miRNAs in this ceRNA network using peripheral blood clinical samples.

resultsIn total, 657 circRNAs were detected in male osteoporosis. The shared mRNAs were significantly enriched in the metabolic pathways, RNA transport, Ubiquitin mediated proteolysis and Amyotrophic lateral sclerosis. Then, three genes, including SETD2, ATM and XPO1, were identified as hub genes with four algorithms. Ultimately, the ceRNA network, involving 4 circRNAs, 40 miRNAs, and 592 mRNAs, was obtained. Using 35 clinical samples, three potential circRNAs and three miRNAs associated with male osteoporosis were selected for validation. It was ultimately found that three miRNAs were upregulated in MOP, while hsa-circ-9130, novel_circ_0014940 and hsa-circ-0054894 were upregulated, hsa-circ-2484 and novel_circ_0033084 were downregulated in patients with MOP.

conclusionWe emphasized the roles of several significantly up- and down-regulated circRNAs and four circRNAs derived from three hub genes in male osteoporosis. Differences in expression were confirmed for three miRNAs and five circRNAs in the ceRNA network among patients with male osteoporosis.

Indexed as

Computational BiologyMicroRNAsOsteoporosisRNA, CircularAgedBiomarkersGene Expression ProfilingGene Regulatory NetworksHumansMaleMiddle AgedRNA, MessengerBiomarkersMicroRNAsRNA, CircularRNA, MessengerceRNAcircRNAHost geneMale osteoporosis

Identifiers

PMID39905402
PMCPMC11796104

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