Evidence map›Paper›PMID 39905246›Full record

ArticleNature cell biology2025

Functional screen identifies RBM42 as a mediator of oncogenic mRNA translation specificity.

Joanna R Kovalski, Goksu Sarioglu, Vishvak Subramanyam, Grace Hernandez, Gilles Rademaker, Juan A Oses-Prieto, Macey Slota, Nimmy Mohan, Kaylee Yiakis, Isabelle Liu and 7 more

Abstract read
In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Regulating MYC translation in cancer.Nature cell biology · 2025
    Article
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Joanna R KovalskiDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0001-8436-6656
Goksu SariogluDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-2864-5682
Vishvak SubramanyamDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.
Grace HernandezHelen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, USA.
Gilles RademakerHelen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, USA.
Juan A Oses-PrietoDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-4759-2341
Macey SlotaDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-6461-4736
Nimmy MohanDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.
Kaylee YiakisDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.
Isabelle LiuDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0009-0009-7871-2722
Kwun Wah WenDepartment of Pathology, University of California San Francisco, San Francisco, CA, USA.
Grace E KimDepartment of Pathology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-4603-9448
Sohit MiglaniDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-8075-320X
Alma L BurlingameDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.
Hani GoodarziDepartment of Urology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-9648-8949
Rushika M PereraHelen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-2435-2273
Davide RuggeroDepartment of Urology, University of California San Francisco, San Francisco, CA, USA. davide.ruggero@ucsf.edu.ORCID http://orcid.org/0000-0002-9444-5865

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Alan Ashworth · 1999 to 2026
$209.7M
Mechanisms of regulated translation control in cancer and its therapeutic implicationsR35CA242986 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RUGGERO, DAVIDE · 2019 to 2025
$6.4M
Restorative practice in repairing harm and promoting safe and inclusive practices in the laboratory.T32GM136547 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Adrian Erlebacher, Anita Sil · 2020 to 2026
$4.5M
Identifying Molecular Drivers of Cellular Plasticity in Pancreatic CancerR01CA240603 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PERERA, RUSHIKA MIRIAM · 2020 to 2024
$1.8M
Illumina NovaSeq 6000 Sequencing SystemS10OD028511 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHOW, ERIC D · 2020 to 2020
$583k
American Cancer Society (American Cancer Society, Inc.) 133966-PF-20-009-01-RMCAmerican Cancer Society (American Cancer Society, Inc.) American Cancer Society Research Professor AwardNCI NIH HHS P30 CA082103NCI NIH HHS R01 CA240603NCI NIH HHS R35 CA242986NIGMS NIH HHS T32 GM136547NIH HHS S10 OD028511U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA240603U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R35CA242986
6 · The paper itself

Abstract

Oncogenic protein dosage is tightly regulated to enable cancer formation but how this is regulated by translational control remains unknown. The Myc oncogene is a paradigm of an exquisitely regulated oncogene and a driver of pancreatic ductal adenocarcinoma (PDAC). Here we use a CRISPR interference screen in PDAC cells to identify activators of selective MYC translation. The top hit, the RNA-binding protein RBM42, is highly expressed in PDAC and predicts poor survival. We show that RBM42 binds and selectively regulates the translation of MYC and a precise suite of pro-oncogenic transcripts, including JUN and EGFR. Mechanistically, we find that RBM42 binds and remodels the MYC 5' untranslated region structure, facilitating the formation of the translation pre-initiation complex. Importantly, RBM42 is necessary for PDAC tumorigenesis in a Myc-dependent manner in vivo. This work transforms the understanding of the translational code in cancer and illuminates therapeutic openings to target the expression of oncogenes.

Indexed as

Carcinoma, Pancreatic DuctalPancreatic NeoplasmsProtein BiosynthesisProto-Oncogene Proteins c-mycRNA-Binding ProteinsRNA, Messenger5' Untranslated RegionsAnimalsCell Line, TumorErbB ReceptorsGene Expression Regulation, NeoplasticHumansMiceOncogenes5' Untranslated RegionsEGFR protein, humanErbB ReceptorsMYC protein, humanProto-Oncogene Proteins c-mycRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID39905246
PMCPMC12758615

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.