Evidence map›Paper›PMID 39902977›Full record

ArticleMicrobiology spectrum2025

Discordance in genotypic and phenotypic drug susceptibility results: time to reconsider critical concentration of rifampicin.

Arti Shrivas, Sarman Singh, Jitendra Singh, Prem Shankar, Payal Soni, Syed Beenish Rufai, Anand Maurya, Shashank Purwar

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Phenotypic and genome-based characterization ofFrontiers in microbiology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Arti ShrivasDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Sarman SinghDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.ORCID 0000-0002-0749-9647
Jitendra SinghTranslational Medicine Centre, All India Institute of Medical Sciences, Bhopal, India.
Prem ShankarDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Payal SoniDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Syed Beenish RufaiDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Anand MauryaDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Shashank PurwarDepartment of Microbiology, All India Institute of Medical Sciences, Bhopal, India.

Funding

Indian Council of Medical Research (ICMR) 5/8/5/41/2016/ECD-I
6 · The paper itself

Abstract

The objective of this study is to correlate IMPORTANCE: Tuberculosis (TB) remains a leading cause of morbidity and mortality worldwide, killing millions every year. The emergence of multidrug-resistant and extensively drug-resistant TB forms poses a challenge to the TB control programs. In the past few decades, several molecular tests for rapid detection and drug resistance determination have been developed. But these can miss the genetic mutations that confer low-level resistance to rifampicin (RIF), a critical constituent for treating drug-susceptible TB. On the other hand, for the phenotypic methods, a cutoff value is fixed, known as critical concentration (CC). The current WHO-endorsed CC for rifampicin is 1.0 μg/mL in liquid culture for confirmation of drug resistance; because of that in this system too, low-level RIF resistance may not be correctly identified. Therefore, it is important that either the CC for phenotypic methods is lowered or the specific mutations are included in the molecular tests. This study provides important insights in that direction.

Indexed as

Antitubercular AgentsMycobacterium tuberculosisRifampinBacterial ProteinsDNA-Directed RNA PolymerasesDrug Resistance, BacterialGenotypeHigh-Throughput Nucleotide SequencingHumansMicrobial Sensitivity TestsMutationPhenotypeTuberculosisAntitubercular AgentsBacterial ProteinsDNA-Directed RNA PolymerasesRifampinrpoB protein, Mycobacterium tuberculosiscritical concentrationminimum inhibitory concentrationmutationsrifampicintuberculosis

Identifiers

PMID39902977
PMCPMC11878084

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.