Evidence map›Paper›PMID 39900899›Full record

ArticleNature communications2025

Translaminar synchronous neuronal activity is required for columnar synaptic strengthening in the mouse neocortex.

John Vargas-Ortiz, Lin Lin, Vena K Martinez, Rong-Jian Liu, Rachel Babij, Zhe Ran S Duan, Sam Wacks, Liyuan Sun, Amanda Wang, Sajida Khan and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

John Vargas-Ortiz *Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-1485-6363
Lin Lin *Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-9640-0687
Vena K MartinezDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
Rong-Jian LiuDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
Rachel BabijCenter for Neurogenetics, Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
Zhe Ran S DuanCenter for Neurogenetics, Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
Sam WacksCenter for Neurogenetics, Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
Liyuan SunDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
Amanda WangDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
Sajida KhanDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.
John Lee Soto-VargasDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-7921-8958
Natalia V De Marco GarcíaCenter for Neurogenetics, Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA. nad2018@med.cornell.edu.ORCID http://orcid.org/0000-0002-5540-258X
Alicia CheDepartment of Psychiatry, Yale School of Medicine, New Haven, CT, USA. alicia.che@yale.edu.ORCID http://orcid.org/0000-0002-7530-8531

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Neural Mechanism for the assembly of GABAergic in the cerebral cortexR01MH110553 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI Natalia Vanesa De Marco Garcia · 2016 to 2026
$4.2M
A Circuit Mechanism for the Development of Cortico-cortical ConnectivityR01NS116137 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI DE MARCO GARCIA, NATALIA VANESA · 2020 to 2024
$2.6M
GABAergic Interneuron Dysfunction in Developing Cortical Circuits Underlying Autism Spectrum DisordersR01MH125006 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI DE MARCO GARCIA, NATALIA VANESA, RAJADHYAKSHA, ANJALI M · 2021 to 2025
$2.1M
Neural Mechanisms Linking Sensory Perception and Social BehaviorR01NS133434 · NINDS · YALE UNIVERSITY · PI Alicia Yue Che · 2023 to 2026
$1.6M
Effects of Early-life Cannabinoid Exposure on Prefrontal Circuitry and Cognitive Behavior across DevelopmentR01DA059378 · NIDA · YALE UNIVERSITY · PI Alicia Yue Che · 2024 to 2026
$1.5M
Maturation of Somatosensory Circuits for Social BehaviorsR00NS114166 · NINDS · YALE UNIVERSITY · PI CHE, ALICIA YUE · 2022 to 2024
$740k
Maturation of somatosensory circuits for social behaviorsK99NS114166 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI CHE, ALICIA YUE · 2020 to 2021
$214k
The Instruction of Sensory Inputs in Inhibitory Circuit Maturation in the Somatosensory CortexF30MH117939 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI BABIJ, RACHEL A · 2018 to 2021
$191k
Brain and Behavior Research Foundation (Brain & Behavior Research Foundation) Young Investigator AwardNIDA NIH HHS R01 DA059378NIGMS NIH HHS T32 GM007739NIMH NIH HHS F30 MH117939NIMH NIH HHS R01 MH110553NIMH NIH HHS R01 MH125006NINDS NIH HHS K99 NS114166NINDS NIH HHS R00 NS114166NINDS NIH HHS R01 NS116137NINDS NIH HHS R01 NS133434U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM007739U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) 1R01MH125006U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) 2R01MH110553U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) 5F30MH117939U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) 1R01NS116137U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) 1R01NS133434U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) 1R01DA0593578
6 · The paper itself

Abstract

Synchronous neuronal activity is a hallmark of the developing mouse primary somatosensory cortex. While the patterns of synchronous neuronal activity in cortical layer 2/3 have been well described, the source of the robust layer 2/3 activity is still unknown. Using a novel microprism preparation and in vivo 2-photon imaging in neonatal mice, we show that synchronous neuronal activity is organized in barrel columns across layers. Monosynaptic rabies tracing and slice electrophysiology experiments reveal that layer 2/3 pyramidal neurons receive significant layer 5 inputs during the first postnatal week, and silencing layer 5 synaptic outputs results in a significant reduction in spontaneous activity, abnormal sensory-evoked activity and disrupted layer 4-layer 2/3 connectivity. Our results demonstrate that translaminar layer 5-layer 2/3 connectivity plays an important role in synchronizing the developing barrel column to ensure the strengthening of layer 4-layer 2/3 connections, supporting the formation of the canonical cortical organization in barrel cortex.

Indexed as

NeocortexNeuronsPyramidal CellsSomatosensory CortexSynapsesAnimalsAnimals, NewbornFemaleMaleMiceMice, Inbred C57BL

Identifiers

PMID39900899
PMCPMC11791040

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.