ArticleFrontiers in plant science2024
Performing whole-genome association analysis of winter wheat plant height using the 55K chip.
Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
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2 citing papers in PubMed.
- Genetic dissection of cold stress tolerance and yield potential under cold stress in nested synthetic wheat (Triticum aestivum L.) introgression libraries using multi-locus genome-wide association and haplotype analysis.Functional & integrative genomics · 2026Article
- Genetic identification and characterization of putatively novel, stable, and validated loci for plant height in wheat (Triticum aestivum L.).BMC genomics · 2026Article
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14 authors.
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Abstract
Plant height is a critical agronomic that affects both plant architecture and yield. To decipher the genetic mechanisms underlying winter wheat plant height and identify candidate genes associated with this trait, we conducted phenotypic analysis on 239 wheat varieties (lines) collected from around the world. This analysis was complemented by genotyping using the wheat 55K SNP chip. A Wholegenome association analysis (GWAS) of wheat plant height was conducted utilizing the MLM (Q+K) model within TASSLE software. The results revealed significant phenotypic variation in wheat plant height across different years, with coefficients of variation ranging from 0.96% to 1.97%. Additionally, there was a strong correlation in plant height measurements between different years. GWAS identified 44 SNP markers significantly associated with wheat plant height across various environments (P ≤ 0.00001), predominantly distributed on chromosomes 1B, 1D, 2A, 2B, 2D, 3B, 3D, 4A, 4B, 6B, 6D, and 7D, explaining individual phenotypic variance rates ranging from 5.00% to 11.11%. Further, by mining association loci with substantial phenotypic effects and stability across multiple environments, seven candidate genes related to wheat plant height have been identified. This study provides new genetic markers and resources for improving wheat plant height.
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