Evidence map›Paper›PMID 39897453›Full record

ArticleApplied magnetic resonance2024

Differentiating Unimodal and Multimodal Distributions in Pulsed Dipolar Spectroscopy Using Wavelet Transforms.

Aritro Sinha Roy, Jack H Freed, Madhur Srivastava

Abstract read
In one paragraph

Article in Applied magnetic resonance, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Aritro Sinha RoyDepartment of Chemistry and Chemical Biology, Cornell University, Baker Laboratory, Ithaca, 14853, NY, USA.
Jack H FreedDepartment of Chemistry and Chemical Biology, Cornell University, Baker Laboratory, Ithaca, 14853, NY, USA.
Madhur SrivastavaDepartment of Chemistry and Chemical Biology, Cornell University, Baker Laboratory, Ithaca, 14853, NY, USA.

Funding

National Biomedical Resource for Electron-Spin Resonance Spectroscopy (ACERT)R24GM146107 · NIGMS · CORNELL UNIVERSITY · PI BRIAN R CRANE, Jack H Freed · 2022 to 2026
$6.4M
Advancing our knowledge of viral membrane fusion and of IDP-membrane interactions by ESRR35GM148272 · NIGMS · CORNELL UNIVERSITY · PI Jack H Freed · 2023 to 2026
$1.9M
NIGMS NIH HHS R24 GM146107NIGMS NIH HHS R35 GM148272
6 · The paper itself

Abstract

Site directed spin labeling has enabled protein structure determination using electron spin resonance (ESR) pulsed dipolar spectroscopy (PDS). Small details in a distance distribution can be key to understanding important protein structure-function relationships. A major challenge has been to differentiate unimodal and overlapped multimodal distance distributions. They often yield similar distributions and dipolar signals. Current model-free distance reconstruction techniques such as Srivastava-Freed Singular Value Decomposition (SF-SVD) and Tikhonov regularization can suppress these small features in uncertainty and/or error bounds, despite being present. In this work, we demonstrate that continuous wavelet transform (CWT) can distinguish PDS signals from unimodal and multimodal distance distributions. We show that periodicity in CWT representation reflects unimodal distributions, which is masked for multimodal cases. This work is meant as a precursor to a cross-validation technique, which could indicate the modality of the distance distribution.

Indexed as

Continuous wavelet transformElectron spin resonanceProtein structure determinationPulsed dipolar spectroscopyTime-frequency analysis

Identifiers

PMID39897453
PMCPMC11781376

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.