Evidence map›Paper›PMID 39896680›Full record

ArticlebioRxiv : the preprint server for biology2025

Glycan-reactive antibodies isolated from human HIV-1 vaccine trial participants show broad pathogen cross-reactivity.

Parker J Jamieson, Xiaoying Shen, Alexandra A Abu-Shmais, Perry T Wasdin, Katarzyna Janowska, Robert J Edwards, Garrett Scapellato, Simone I Richardson, Nelia P Manamela, Shuying Liu and 23 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors.

Parker J JamiesonVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-8992-6747
Xiaoying ShenDepartment of Surgery, Duke University School of Medicine, Durham, NC 27710, USA.
Alexandra A Abu-ShmaisVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-5514-3277
Perry T WasdinVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-7351-2048
Katarzyna JanowskaDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Robert J EdwardsDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.ORCID 0000-0003-4446-1194
Garrett ScapellatoDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Simone I RichardsonSouth African Medical Research Council Antibody Immunity Research Unit, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Nelia P ManamelaSouth African Medical Research Council Antibody Immunity Research Unit, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Shuying LiuDepartment of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Maggie BarrDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Rebecca A GillespieVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Jessica MimmsDivision of Infectious Diseases, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Naveenchandra SuryadevaraVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Ty A SornbergerVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-5483-1756
Seth ZostVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Rob ParksDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Shelby FlahertyDepartment of Surgery, Duke University School of Medicine, Durham, NC 27710, USA.
Alexis K JankeVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Bethany N HowardVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0009-0002-6307-1722
Yukthi P SureshVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Ruth M RuprechtTexas Biomedical Research Institute and Southwest National Primate Research Center, San Antonio, TX 78227, USA.
James E CroweVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0002-0049-1079
Robert H CarnahanVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Justin R BaileyDivision of Infectious Diseases, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Kanekiyo MasaruDepartment of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Barton F HaynesDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Penny L MooreSouth African Medical Research Council Antibody Immunity Research Unit, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Priyamvada AcharyaDepartment of Surgery, Duke University School of Medicine, Durham, NC 27710, USA.
David C MontefioriDepartment of Surgery, Duke University School of Medicine, Durham, NC 27710, USA.
Spyros A KalamsInfectious Diseases Unit, Department of Internal Medicine; Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Shan LuDepartment of Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA.
Ivelin S GeorgievVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA.

Funding

Nonhuman primate studies for development of a prototype HIV vaccine that induces broadly neutralizing antibodiesUM1AI144371 · NIAID · DUKE UNIVERSITY · PI HAYNES, BARTON F. · 2019 to 2025
$190.4M
Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ben Ho Park · 1995 to 2026
$172.8M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
Project 3 - Dynamics of latent HIV-1 reservoirs: High resolution antigenic mapping and strategies to block reboundU54AI170752 · NIAID · DUKE UNIVERSITY · PI Maria Blasi · 2022 to 2026
$32.0M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MARY Kay WASHINGTON · 2002 to 2026
$29.9M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
VANTAGE:Consolidation to create the Vanderbilt Technologies for Advanced GenomicsG20RR030956 · NCRR · VANDERBILT UNIVERSITY · PI PIETENPOL, JENNIFER A · 2010 to 2010
$8.7M
Molecular and structural characterization of broadly neutralizing anti-HCV antibodiesR01AI127469 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Justin Richard Bailey · 2017 to 2026
$6.8M
High-throughput mapping of antigen specificity to B-cell-receptor sequence for characterizing antibody responses in HIV-vaccinated and infected individualsR01AI152693 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GEORGIEV, IVELIN · 2020 to 2023
$3.4M
Structural characterization of Fab-dimerized glycan-reactive antibodies that neutralize HIV-1R01AI165147 · NIAID · DUKE UNIVERSITY · PI ACHARYA, PRIYAMVADA, WILLIAMS, WILTON B · 2021 to 2025
$3.4M
Technologies for High-Throughput Mapping of Antigen Specificity to B-Cell-Receptor SequenceR01AI175245 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ivelin Georgiev · 2023 to 2026
$3.4M
NCI NIH HHS P30 CA068485NCRR NIH HHS G20 RR030956NCRR NIH HHS UL1 RR024975NEI NIH HHS P30 EY008126NIAID NIH HHS HHSN272201800004CNIAID NIH HHS R01 AI127469NIAID NIH HHS R01 AI152693NIAID NIH HHS R01 AI165147NIAID NIH HHS R01 AI175245NIAID NIH HHS U54 AI170752NIAID NIH HHS UM1 AI144371NIDDK NIH HHS P30 DK058404Wellcome Trust
6 · The paper itself

Abstract

HIV-1 continues to pose a significant global health challenge, requiring ongoing research into effective prevention and treatment strategies. Understanding the B cell repertoire that can be engaged upon vaccination in humans is crucial for the development of future preventive vaccines. In this study, PBMCs from HIV-negative participants in the multivalent HVTN124 human HIV-1 vaccine clinical trial were interrogated for HIV-reactive B cells using LIBRA-seq, a high-throughput B cell mapping technology. We report the discovery of glycan-reactive antibodies capable of neutralizing diverse heterologous HIV-1 virus strains. Further, isolated antibodies showed broad cross-reactivity against antigens from a variety of other pathogens, while remaining mostly negative on autoreactivity assays. The emerging class of glycan-reactive virus-neutralizing antibodies with exceptional breadth of pathogen cross-reactivity may present an effective target for vaccination at the population level.

Identifiers

PMID39896680
PMCPMC11785028

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.