Evidence map›Paper›PMID 39896623›Full record

ArticlebioRxiv : the preprint server for biology2025

Bayesian phylodynamic inference of population dynamics with dormancy.

Lorenzo Cappello, Wai Tung 'Jack' Lo, Joy Z Zhang, Peiyu Xu, Daniel Barrow, Ishani Chopra, Andrew G Clark, Martin T Wells, Jaehee Kim

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Lorenzo CappelloDepartments of Economics and Business, Universitat Pompeu Fabra, Barcelona, Spain.ORCID 0000-0001-6682-908X
Wai Tung 'Jack' LoDepartment of Computational Biology, Cornell University, Ithaca, New York, USA.
Joy Z ZhangCenter for Applied Mathematics, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-6734-1665
Peiyu XuDepartment of Molecular Biology & Genetics, Cornell University, Ithaca, New York, USA.ORCID 0000-0003-4733-2806
Daniel BarrowDepartment of Computational Biology, Cornell University, Ithaca, New York, USA.
Ishani ChopraDepartment of Computational Biology, Cornell University, Ithaca, New York, USA.
Andrew G ClarkDepartment of Computational Biology, Cornell University, Ithaca, New York, USA.ORCID 0000-0001-7159-8511
Martin T WellsDepartment of Statistics and Data Science, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-9750-9529
Jaehee KimDepartment of Computational Biology, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-5210-2004

Funding

Transmission Aerobiology of M. tuberculosis: Genes and Metabolic Pathways That Sustain Mtb Across an Evolutionary BottleneckP01AI159402 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI NATHAN, CARL FRANCIS, RHEE, KYU Y · 2021 to 2025
$15.8M
Tree-based population genetics methods for genetic epidemiologyR35GM156957 · NIGMS · CORNELL UNIVERSITY · PI Jaehee Kim · 2025 to 2026
$712k
NIAID NIH HHS P01 AI159402NIGMS NIH HHS R35 GM156957
6 · The paper itself

Abstract

Many organisms employ reversible dormancy, or

Indexed as

Bayesian inferenceCoalescentDormancyPhylodynamicsPopulation dynamics

Identifiers

PMID39896623
PMCPMC11785064

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.