Evidence map›Paper›PMID 39896460›Full record

ArticlebioRxiv : the preprint server for biology2025

Adaptation shapes the representational geometry in mouse V1 to efficiently encode the environment.

Mario Dipoppa, Ramon Nogueira, Stéphane Bugeon, Yoni Friedman, Charu B Reddy, Kenneth D Harris, Dario L Ringach, Kenneth D Miller, Matteo Carandini, Stefano Fusi

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mario DipoppaDepartment of Neurobiology, University of California, Los Angeles, CA, USA.ORCID 0000-0002-4454-4224
Ramon NogueiraCenter for Theoretical Neuroscience, Zuckerman Institute for Brain Mind and Behavior, Columbia University, NY, USA.ORCID 0000-0002-9706-9236
Stéphane BugeonInstitute of Neurology, University College London, UK.ORCID 0000-0002-5703-4848
Yoni FriedmanCenter for Theoretical Neuroscience, Zuckerman Institute for Brain Mind and Behavior, Columbia University, NY, USA.ORCID 0000-0003-4966-6869
Charu B ReddyInstitute of Neurology, University College London, UK.ORCID 0000-0002-8195-3326
Kenneth D HarrisInstitute of Neurology, University College London, UK.ORCID 0000-0002-5930-6456
Dario L RingachDepartment of Neurobiology, University of California, Los Angeles, CA, USA.ORCID 0000-0001-6439-334X
Kenneth D MillerCenter for Theoretical Neuroscience, Zuckerman Institute for Brain Mind and Behavior, Columbia University, NY, USA.ORCID 0000-0002-1433-0647
Matteo CarandiniInstitute of Ophthalmology, University College London, UK.ORCID 0000-0003-4880-7682
Stefano FusiCenter for Theoretical Neuroscience, Zuckerman Institute for Brain Mind and Behavior, Columbia University, NY, USA.ORCID 0000-0002-3035-6652

Funding

Validating Theoretical Models with Neurophysiology and OptogeneticsU19NS107613 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CAI, LONG · 2018 to 2022
$16.7M
Thalamic constraints on cortical organizationR01EY034488 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RINGACH, DARIO L · 2023 to 2025
$1.8M
Population codes and sensory discriminationR01NS116471 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RINGACH, DARIO L · 2023 to 2024
$789k
Cortical adaptation in neural populationsR21EY035064 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RINGACH, DARIO L · 2024 to 2025
$424k
NEI NIH HHS R01 EY034488NEI NIH HHS R21 EY035064NINDS NIH HHS R01 NS116471NINDS NIH HHS U19 NS107613Wellcome Trust
6 · The paper itself

Abstract

Sensory adaptation dynamically changes neural responses as a function of previous stimuli, profoundly impacting perception. The response changes induced by adaptation have been characterized in detail in individual neurons and at the population level after averaging across trials. However, it is not clear how adaptation modifies the aspects of the representations that relate more directly to the ability to perceive stimuli, such as their geometry and the noise structure in individual trials. To address this question, we recorded from a population of neurons in the mouse visual cortex and presented one stimulus (an oriented grating) more frequently than the others. We then analyzed these data in terms of representational geometry and studied the ability of a linear decoder to discriminate between similar visual stimuli based on the single-trial population responses. Surprisingly, the discriminability of stimuli near the adaptor increased, even though the responses of individual neurons to these stimuli decreased. Similar changes were observed in artificial neural networks trained to reconstruct the visual stimulus under metabolic constraints. We conclude that the paradoxical effects of adaptation are consistent with the efficient coding framework, allowing the brain to improve the representation of frequent stimuli while limiting the associated metabolic cost.

Identifiers

PMID39896460
PMCPMC11785004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.