Evidence map›Paper›PMID 39895669›Full record

ArticleData in brief2025

Transcriptome datasets of salt-stressed tomato plants treated with zinc oxide nanoparticles.

Mostafa Ahmed, Zoltán Tóth, Diaa Attia Marrez, Roquia Rizk, Donia Abdul-Hamid, Kincső Decsi

Abstract read
In one paragraph

Article in Data in brief, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mostafa AhmedFestetics Doctoral School, Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Georgikon Campus, 8360 Keszthely, Hungary.
Zoltán TóthInstitute of Agronomy, Hungarian University of Agriculture and Life Sciences, Georgikon Campus, 8360 Keszthely, Hungary.
Diaa Attia MarrezFood Toxicology and Contaminants Department, National Research Centre, Dokki, Cairo 12622, Egypt.
Roquia RizkDepartment of Agricultural Biochemistry, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.
Donia Abdul-HamidHeavy Metals Department, Central Laboratory for The Analysis of Pesticides and Heavy Metals in Food (QCAP), Dokki, Cairo 12311, Egypt.
Kincső DecsiInstitute of Agronomy, Hungarian University of Agriculture and Life Sciences, Georgikon Campus, 8360 Keszthely, Hungary.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salinity diminishes agricultural productivity and quality, resulting in overall economic losses on a worldwide scale. Zinc oxide nanoparticles (ZnO-NPs) have been found to enhance plant physiological and metabolic processes, as well as increase overall resilience to abiotic stressors. A research study was undertaken to assess the effects of foliar application of chemically produced ZnO-NPs on tomato plants, both in the presence and absence of a NaCl stressor. The datasets were obtained through the utilization of the shallow mRNA sequencing technology. Six datasets from the SRA were uploaded to NCBI. The aforementioned datasets encompass the Transcriptome Shotgun Assembly (TSA), the contigs that underwent blasting, mapping, and annotation from the pre-processed datasets, and the count table derived from the quantification of RNA-seq reads. All the aforementioned data is encompassed under the Mendeley database. Moving forward, the utilization of databases will facilitate the examination of modifications in plant biochemical reactions at the level of gene expression.

Indexed as

Illumina NGSNaClOsmotic pressureRNA-seqSolanum lycopersicumZnO-NPs

Identifiers

PMID39895669
PMCPMC11783048

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.