Evidence map›Paper›PMID 39893347›Full record

ArticleArchives of virology2025

Emergence of a natural reassortant between Shamonda and Sathuperi viruses of the species Orthobunyavirus schmallenbergense in Japan.

Hisayuki Tomochi, Yuji Mekaru, Katsunori Murota, Misako Konishi, Rina Ikeda, Tohru Yanase

Abstract read
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In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hisayuki TomochiOkinawa Prefectural Institute of Animal Health, Uruma, Japan.
Yuji MekaruOkinawa Prefectural Institute of Animal Health, Uruma, Japan.
Katsunori MurotaKagoshima Research Station, National Institute of Animal Health, National Agriculture and Food Research Organization (NARO), 2702, Chuzan, Kagoshima, 891-0105, Japan.
Misako KonishiKagoshima Research Station, National Institute of Animal Health, National Agriculture and Food Research Organization (NARO), 2702, Chuzan, Kagoshima, 891-0105, Japan.
Rina IkedaKagoshima Research Station, National Institute of Animal Health, National Agriculture and Food Research Organization (NARO), 2702, Chuzan, Kagoshima, 891-0105, Japan.
Tohru YanaseKagoshima Research Station, National Institute of Animal Health, National Agriculture and Food Research Organization (NARO), 2702, Chuzan, Kagoshima, 891-0105, Japan. tyanase@affrc.go.jp.ORCID http://orcid.org/0000-0003-0838-9156

Funding

the Ministry of Agriculture, Forestry, and Fisheries of Japan JPJ008617.18065101the Ministry of Agriculture, Forestry, and Fisheries of Japan JPJ008617.23812859
6 · The paper itself

Abstract

The whole-genome sequences of orthobunyaviruses isolated from cattle reared on Yonaguni Island (the western-most point of Japan's territory) were determined. The sequences of their S and L RNA segments were observed to be almost identical to those of Shamonda virus (SHAV) isolates identified in Japan, whereas the sequences of their M RNA segments were very similar to those of Japanese isolates of Sathuperi virus (SATV). Our findings indicate that the two novel isolates are natural reassortants between SHAV and SATV, which share a genome segment organization similar to that of Schmallenberg virus. The nucleotide sequence of the 5' non-coding region of the novel isolates differs from those of previously sequenced SATV isolates, suggesting that the M RNA segments of the reassortants were not derived from SATV strains that were detected recently in Japan.

Indexed as

Bunyaviridae InfectionsCattle DiseasesOrthobunyavirusReassortant VirusesAnimalsCattleGenome, ViralJapanPhylogenyRNA, ViralRNA, Viral

Identifiers

PMID39893347

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.