Evidence map›Paper›PMID 39891671›Full record

ArticleGenetics2025

A Bayesian approach to correcting the attenuation bias of regression using polygenic risk score.

Geyu Zhou, Xinyue Qie, Hongyu Zhao

Abstract read
In one paragraph

Article in Genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Geyu ZhouDepartment of Biostatistics, Yale School of Public Health, Yale University, New Haven, CT 06511, USA.
Xinyue QieDepartment of Biostatistics, Yale School of Public Health, Yale University, New Haven, CT 06511, USA.
Hongyu ZhaoDepartment of Biostatistics, Yale School of Public Health, Yale University, New Haven, CT 06511, USA.ORCID 0000-0003-1195-9607

Funding

Statistical Methods for Genetic Risk Predictions across Diverse PopulationsR01HG012735 · NHGRI · YALE UNIVERSITY · PI ZHAO, HONGYU · 2022 to 2025
$2.4M
Novel statistical methods and tools to integrate multiple endophenotypes and functional annotation data to study the roles of rare variants in complex human diseases using sequencing dataR01GM134005 · NIGMS · YALE UNIVERSITY · PI WU, BAOLIN, ZHAO, HONGYU · 2020 to 2023
$1.6M
Boehringer IngelheimNHGRI NIH HHS R01 HG012735NIGMS NIH HHS R01 GM134005NIH HHS R01 HG012735NSF DMS 1902903
6 · The paper itself

Abstract

Polygenic risk score has become increasingly popular for predicting the value of complex traits. In many settings, polygenic risk score is used as a covariate in regression analysis to study the association between different phenotypes. However, measurement error in polygenic risk score causes attenuation bias in the estimation of regression coefficients. In this paper, we employ a Bayesian approach to accounting for the measurement error of polygenic risk score and correcting the attenuation bias in linear and logistic regression. Through simulation, we show that our approach is able to obtain approximately unbiased estimation of coefficients and credible intervals with correct coverage probability. We also empirically compare our Bayesian measurement error model with the conventional regression model by analyzing real traits in the UK Biobank. The results demonstrate the effectiveness of our approach as it significantly reduces the error in coefficient estimates.

Indexed as

Models, GeneticMultifactorial InheritanceBayes TheoremGenetic Risk ScoreHumansRegression AnalysisGWASmeasurement errorpolygenic risk score

Identifiers

PMID39891671
PMCPMC12168083

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.