Evidence map›Paper›PMID 39890969›Full record

ArticleScientific reports2025

Evaluating GPT models for clinical note de-identification.

Bayan Altalla', Sameera Abdalla, Ahmad Altamimi, Layla Bitar, Amal Al Omari, Ramiz Kardan, Iyad Sultan

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bayan Altalla'King Hussein Cancer Center, Queen Rania Street, Amman, Jordan. bayan.ahmad995b@gmail.com.
Sameera AbdallaPrincess Sumaya University for Technology, Khalil Al-Saket St, Amman, Jordan.
Ahmad AltamimiPrincess Sumaya University for Technology, Khalil Al-Saket St, Amman, Jordan.
Layla BitarKing Hussein Cancer Center, Queen Rania Street, Amman, Jordan.
Amal Al OmariKing Hussein Cancer Center, Queen Rania Street, Amman, Jordan.
Ramiz KardanUniversity of Jordan, Queen Rania Street, Amman, Jordan.
Iyad SultanKing Hussein Cancer Center, Queen Rania Street, Amman, Jordan. isultan@khcc.jo.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid digitalization of healthcare has created a pressing need for solutions that manage clinical data securely while ensuring patient privacy. This study evaluates the capabilities of GPT-3.5 and GPT-4 models in de-identifying clinical notes and generating synthetic data, using API access and zero-shot prompt engineering to optimize computational efficiency. Results show that GPT-4 significantly outperformed GPT-3.5, achieving a precision of 0.9925, a recall of 0.8318, an F1 score of 0.8973, and an accuracy of 0.9911. These results demonstrate GPT-4's potential as a powerful tool for safeguarding patient privacy while increasing the availability of clinical data for research. This work sets a benchmark for balancing data utility and privacy in healthcare data management.

Indexed as

Computer SecurityConfidentialityElectronic Health RecordsAlgorithmsHumans

Identifiers

PMID39890969
PMCPMC11785955

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.