Evidence map›Paper›PMID 39885276›Full record

ArticleScientific reports2025

Optimized convolutional neural network using African vulture optimization algorithm for the detection of exons.

K Jayasree, Malaya Kumar Hota

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

2 authors.

K JayasreeDepartment of Communication Engineering, School of Electronics Engineering, Vellore Institute of Technology, Vellore, Tamil Nadu, 632014, India.
Malaya Kumar HotaDepartment of Communication Engineering, School of Electronics Engineering, Vellore Institute of Technology, Vellore, Tamil Nadu, 632014, India. mkhota.mnnit@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The detection of exons is an important area of research in genomic sequence analysis. Many signal-processing methods have been established successfully for detecting the exons based on their periodicity property. However, some improvement is still required to increase the identification accuracy of exons. So, an efficient computational model is needed. Therefore, for the first time, we are introducing an optimized convolutional neural network (optCNN) for classifying the exons and introns. The study aims to identify the best CNN model that provides improved accuracy for the classification of exons by utilizing the optimization algorithm. In this case, an African Vulture Optimization Algorithm (AVOA) is used for optimizing the layered architecture of the CNN model along with its hyperparameters. The CNN model generated with AVOA yielded a success rate of 97.95% for the GENSCAN training set and 95.39% for the HMR195 dataset. The proposed approach is compared with the state-of-the-art methods using AUC, F1-score, Recall, and Precision. The results reveal that the proposed model is reliable and denotes an inventive method due to the ability to automatically create the CNN model for the classification of exons and introns.

Indexed as

AlgorithmsComputational BiologyExonsNeural Networks, ComputerSequence Analysis, DNAConvolutional Neural NetworksHumansIntronsAfrican vulture optimization algorithm (AVOA)Convolutional neural network (CNN)ExonsModified Gabor wavelet transform (MGWT)Three base periodicity properties (TBP)

Identifiers

PMID39885276
PMCPMC11782572

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.