Evidence map›Paper›PMID 39883660›Full record

ArticlePloS one2025

Prevalence and genetic diversity of tick-borne encephalitis virus in ixodid ticks from specific regions of northwestern Russia.

Alena A Sharova, Nikolay K Tokarevich, Regina R Baimova, Olga A Freylikhman, Islam A Karmokov, Ekaterina G Riabiko, Gelena A Lunina, Roman V Buzinov, Olga V Sokolova, Lidia V Buts and 13 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Tropical medicine and infectious disease · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Alena A SharovaSaint Petersburg Pasteur Institute, St. Petersburg, Russia.ORCID 0000-0003-2086-7480
Nikolay K TokarevichSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Regina R BaimovaSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Olga A FreylikhmanSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Islam A KarmokovSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Ekaterina G RiabikoSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Gelena A LuninaSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Roman V BuzinovNorth-West Public Health Research Center, St. Petersburg, Russia.
Olga V SokolovaFederal Service for the Oversight of Consumer Protection and Welfare Arkhangelsk Oblast, Arkhangelsk, Russia.
Lidia V ButsFederal Service for the Oversight of Consumer Protection and Welfare Leningrad Oblast, St. Petersburg, Russia.
Lubov A BespyatovaInstitute of Biology, Karelian Research Centre, Russian Academy of Sciences, Petrozavodsk, Russia.
Liliya A BubnovaCenter for Hygiene and Epidemiology, Republic of Karelia, Petrozavodsk, Russia.
Olga S SafonovaCenter for Hygiene and Epidemiology, Republic of Karelia, Petrozavodsk, Russia.
Elena L KalininaFederal Service for the Oversight of Consumer Protection and Welfare Pskov Oblast, Pskov, Russia.
Andrey I StankevichCenter for Hygiene and Epidemiology, Pskov Oblast, Pskov, Russia.
Rose VikseNorwegian Institute of Public Health, Oslo, Norway.
Ashild K AndreassenNorwegian Institute of Public Health, Oslo, Norway.
Anna S GladkikhSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Majid ForghaniSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Anastasia S GritsevaSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Margarita R PopovaSaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Edward S RamsaySaint Petersburg Pasteur Institute, St. Petersburg, Russia.
Vladimir G DedkovSaint Petersburg Pasteur Institute, St. Petersburg, Russia.ORCID 0000-0002-5500-0169

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Russia is a country with a high incidence of tick-borne encephalitis (TBE). In northwestern regions of Russia, 110 TBE cases were registered in 2021. The largest numbers of TBE cases were registered in the Arkhangelsk region and St. Petersburg. TBEV seropositivity among healthy individuals, including the unvaccinated population in northwestern Russia, was found in 12.2% of studied samples, indicating active TBEV circulation. The prevalence of TBEV is 2.4% in the two tick species most common in northwestern regions of Russia, Ixodes ricinus and Ixodes persulcatus. However, there is still no comprehensive data on the molecular characterization and phylogenetic analysis of the circulating TBEV strains. The purpose of the study was to determine the prevalence of TBEV and to identify its subtypes in ixodid ticks collected in specific areas of northwestern Russian regions. Phylogenetic analysis of E protein sequences of ten obtained strains showed that they all belong to the Siberian subtype, which were clustered into two groups: the most numerous Baltic group, clusteron 3D; and the Vasilchenko group. However, some unique isolates may form new clusterons.

Indexed as

Encephalitis, Tick-BorneEncephalitis Viruses, Tick-BorneGenetic VariationIxodesIxodidaeAnimalsHumansPhylogenyPrevalenceRussia

Identifiers

PMID39883660
PMCPMC11781730

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.