Evidence map›Paper›PMID 39881987›Full record

ArticleFrontiers in microbiology2024

Endophytic strategies decoded by genome and transcriptome analysis of

Siyuan Yan, Qingchen Zhang, Shuxin Jia, Miaomiao Guo, Qiangqiang Zhang, Peiwen Gu

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Mycobiology · 2026
    Article
  3. Identification and genome insights intoFrontiers in plant science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Siyuan YanCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Qingchen ZhangDepartment of Pharmacotherapy and Translational Research, University of Florida, Gainesville, FL, United States.
Shuxin JiaSchool of Agriculture, Ningxia University, Yinchuan, China.
Miaomiao GuoSchool of Agriculture, Ningxia University, Yinchuan, China.
Qiangqiang ZhangCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Peiwen GuCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Methods: In this study, we conducted (1) a comparative genomic analysis of selected saprophytic, pathogenic, and endophytic fungi, including molecular phylogeny analysis, whole-genome alignment, and divergence date estimation positioning, and (2) transcriptomic profiling of alfalfa roots infected with NQ8GII4. Results: Our findings reveal that NQ8GII4 is genetically closely related to Discussion: This study investigated the comprehensive molecular and genetic mechanisms governing the interaction between NQ8GII4 and alfalfa roots. Beyond the NQ8GII4-alfalfa system, these findings also provide a valuable molecular framework for understanding the mechanism of interactions between endophytic fungi and their host plants.

Indexed as

comparative genomicsendophytic strategyfungal-plant mutualistic associationsFusarium nematophilum strain NQ8GII4transcriptome

Identifiers

PMID39881987
PMCPMC11774914

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.