Evidence map›Paper›PMID 39881117›Full record

ArticleJournal of biomolecular NMR2025

Solid state NMR spectral editing of histidine, arginine and lysine using Hadamard encoding.

Tata Gopinath, Alyssa Kraft, Kyungsoo Shin, Nicholas A Wood, Francesca M Marassi

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. In situ NMR reveals a pH sensor motif in an outer membrane protein that drives bacterial vesicle production.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Tata GopinathDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. gtata@mcw.edu.ORCID http://orcid.org/0000-0002-5237-2135
Alyssa KraftDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.ORCID http://orcid.org/0009-0008-7549-4064
Kyungsoo ShinDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.ORCID http://orcid.org/0000-0003-4836-8798
Nicholas A WoodDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.ORCID http://orcid.org/0000-0003-2527-5441
Francesca M MarassiDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. fmarassi@mcw.edu.ORCID http://orcid.org/0000-0003-2695-5844

Funding

Project 4 - Mechanisms of pyrophosphate dysregulationP01AG081167 · NIA · MEDICAL COLLEGE OF WISCONSIN · PI RICHARD Blair THOMPSON · 2023 to 2026
$13.0M
Membrane Protein Effectors of Pathogen Interactions With HostR35GM118186 · NIGMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Francesca M Marassi · 2016 to 2026
$8.5M
A 600 MHz NMR spectrometer upgrade for the Sanford Burnham Prebys Cancer CenterS10OD028716 · OD · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MARASSI, FRANCESCA M · 2020 to 2020
$926k
Multi-disciplinary analysis of the role of PagC for outer membrane vesicle biogenesisF32AI188770 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI Nicholas A Wood · 2025 to 2026
$152k
NIAID NIH HHS F32 AI188770NIA NIH HHS P01 AG081167NIGMS NIH HHS R35 GM118186NIH HHS GM 118186NIH HHS S10 OD028716
6 · The paper itself

Abstract

The NMR signals from protein sidechains are rich in information about intra- and inter-molecular interactions, but their detection can be complicated due to spectral overlap as well as conformational and hydrogen exchange. In this work, we demonstrate a protocol for multi-dimensional solid-state NMR spectral editing of signals from basic sidechains based on Hadamard matrix encoding. The Hadamard method acquires multi-dimensional experiments in such a way that both the backbone and under-sampled sidechain signals can be decoded for unambiguous editing in the

Indexed as

ArginineHistidineLysineNuclear Magnetic Resonance, BiomolecularProteinsFerritinsNitrogen IsotopesArginineFerritinsHistidineLysineNitrogen IsotopesProteinsFerritin nanocageHadamardSidechainSolid state NMRSpectral aliasingWater exchange

Identifiers

PMID39881117
PMCPMC12500234

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.