Evidence map›Paper›PMID 39881029›Full record

ArticleNature biotechnology2025

AAV capsid prioritization in normal and steatotic human livers maintained by machine perfusion.

Jae-Jun Kim, Simone N T Kurial, Pervinder K Choksi, Miguel Nunez, Tyler Lunow-Luke, Jan Bartel, Julia Driscoll, Chris L Her, Simaron Dhillon, William Yue and 11 more

Abstract read
In one paragraph

Article in Nature biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Review
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  5. Article
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  8. Article
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  11. Revealing the potential of non-transplanted donor organs: a comparative analysis in the Eurotransplant region.Transplant international : official journal of the European Society for Organ Transplantation · 2026
    Article
  12. Review
  13. Review
  14. Viral vector-based gene therapies in the clinic: An update.Bioengineering & translational medicine · 2026
    Review
  15. Article
  16. Review
  17. Article
  18. Identification of a robust promoter in mouse and human hepatocytes by in vivo biopanning of a barcoded AAV library.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  19. Gene-based therapies for steatotic liver disease.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  20. The deLIVERed promises of gene therapy: Past, present, and future of liver-directed gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Jae-Jun Kim *Department of Surgery, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-8948-4501
Simone N T Kurial *Department of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Pervinder K ChoksiDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Miguel NunezDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Tyler Lunow-LukeDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0001-5920-4313
Jan BartelDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Julia DriscollDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Chris L HerDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Simaron DhillonDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.
William YueDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-2601-9378
Abhishek MurtiDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Tin MaoAmbys Medicines, South San Francisco, CA, USA.
Julian N RamosAmbys Medicines, South San Francisco, CA, USA.
Amita TiyaboonchaiOregon Stem Cell Center, Oregon Health & Science University, Portland, OR, USA.ORCID http://orcid.org/0000-0002-0116-7393
Markus GrompeOregon Stem Cell Center, Oregon Health & Science University, Portland, OR, USA.ORCID http://orcid.org/0000-0002-6616-4345
Aras N MattisEli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, CA, USA.
Shareef M SyedDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Bruce M WangDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.
Jacquelyn J MaherDepartment of Medicine, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-2509-8484
Garrett R RollDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA.
Holger WillenbringDepartment of Surgery, University of California, San Francisco, San Francisco, CA, USA. holger.willenbring@ucsf.edu.ORCID http://orcid.org/0000-0002-7397-2957

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
Next-generation human liver gene therapyDP1DK130689 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILLENBRING, HOLGER · 2021 to 2025
$3.9M
California Institute for Regenerative Medicine (CIRM) EDUC4-12812NIDDK NIH HHS DP1 DK130689NIDDK NIH HHS P30 DK026743UC | University of California, San Francisco (UC San Francisco) RAP Team Science GrantU.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) DP1DK130689U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) P30DK026743
6 · The paper itself

Abstract

Therapeutic efficacy and safety of adeno-associated virus (AAV) liver gene therapy depend on capsid choice. To predict AAV capsid performance under near-clinical conditions, we established side-by-side comparison at single-cell resolution in human livers maintained by normothermic machine perfusion. AAV-LK03 transduced hepatocytes much more efficiently and specifically than AAV5, AAV8 and AAV6, which are most commonly used clinically, and AAV-NP59, which is better at transducing human hepatocytes engrafted in immune-deficient mice. AAV-LK03 preferentially transduced periportal hepatocytes in normal liver, whereas AAV5 targeted pericentral hepatocytes in steatotic liver. AAV5 and AAV8 transduced liver sinusoidal endothelial cells as efficiently as hepatocytes. AAV capsid and steatosis influenced vector episome formation, which determines gene therapy durability, with AAV5 delaying concatemerization. Our findings inform capsid choice in clinical AAV liver gene therapy, including consideration of disease-relevant hepatocyte zonation and effects of steatosis, and facilitate the development of AAV capsids that transduce hepatocytes or other therapeutically relevant cell types in the human liver with maximum efficiency and specificity.

Indexed as

CapsidCapsid ProteinsDependovirusFatty LiverLiverAnimalsGenetic TherapyGenetic VectorsHepatocytesHumansMaleMicePerfusionTransduction, GeneticCapsid Proteins

Identifiers

PMID39881029
PMCPMC12304247

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.