Evidence map›Paper›PMID 39880799›Full record

ArticleJournal of industrial microbiology & biotechnology2024

Biocatalytic diversification of abietic acid in Streptomyces.

Caitlin A McCadden, Tyler A Alsup, Ion Ghiviriga, Jeffrey D Rudolf

Abstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Caitlin A McCaddenDepartment of Chemistry, University of Florida, Gainesville, FL, USA.ORCID 0009-0003-5165-4039
Tyler A AlsupDepartment of Chemistry, University of Florida, Gainesville, FL, USA.ORCID 0000-0001-5868-0254
Ion GhivirigaDepartment of Chemistry, University of Florida, Gainesville, FL, USA.ORCID 0000-0001-5812-5170
Jeffrey D RudolfDepartment of Chemistry, University of Florida, Gainesville, FL, USA.ORCID 0000-0003-2718-9651

Funding

Discovery and Biosynthesis of Bacterial TerpenoidsR35GM142574 · NIGMS · UNIVERSITY OF FLORIDA · PI Jeffrey Daniel Rudolf · 2021 to 2026
$2.4M
NMR console upgrade for structural biology and metabolomicsS10OD028753 · OD · UNIVERSITY OF FLORIDA · PI LONG, JOANNA R · 2020 to 2020
$600k
National Science Foundation DMR-1644779NIGMS NIH HHS R35 GM142574NIH HHS R35 GM142574NIH HHS S10 OD028753University of Florida
6 · The paper itself

Abstract

Biocatalysis provides access to synthetically challenging molecules and commercially and pharmaceutically relevant natural product analogs while adhering to principles of green chemistry. Cytochromes P450 (P450s) are among the most superlative and versatile oxidative enzymes found in nature and are desired regio- and stereoselective biocatalysts, particularly for structurally complex hydrocarbon skeletons. We used 10 genome-sequenced Streptomyces strains, selected based on their preponderance of P450s, to biotransform the bioactive diterpenoid abietic acid. We isolated and structurally characterized seven oxidized abietic acid derivatives from three different strains, including four products that are new bacterial biotransformants or enzymatic products. Oxidations (hydroxylation, dehydrogenation, and aromatization) were seen on both the B and C rings of abietic acid and five products had multiple modifications. Notable conversions observed in the study were that of abietic acid to 15-hydroxy-7-oxo-8,11,13-abietatrien-18-oic acid, 7, which involves multiple hydroxylation reactions and dehydrogenation. The findings from this study will lead to identifying P450s or other enzymes that may act as general biocatalysts to modify abietanes and other labdane-type diterpenoid skeletons. ONE-SENTENCE SUMMARY: Genome-guided biotransformation of the bioactive diterpenoid abietic acid in Streptomyces yielded seven oxidized derivatives including four that have not been previously seen from bacteria.

Indexed as

AbietanesCytochrome P-450 Enzyme SystemStreptomycesBiocatalysisBiotransformationHydroxylationOxidation-ReductionAbietanesabietic acidCytochrome P-450 Enzyme SystemAbietaneBiocatalysisCytochrome P450DiterpenoidGenome mining

Identifiers

PMID39880799
PMCPMC11812575

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.