Evidence map›Paper›PMID 39879234›Full record

ArticlePLoS computational biology2025

The role of oscillations in grid cells' toroidal topology.

Giovanni di Sarra, Siddharth Jha, Yasser Roudi

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Article in PLoS computational biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Giovanni di SarraKavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Faculty of Medicine and Health Sciences, Norwegian University of Science and Technology, Trondheim, Norway.ORCID 0009-0009-8561-1153
Siddharth JhaW.M. Keck Center for Neurophysics, Department of Physics and Astronomy, University of California Los Angeles, Los Angeles, California, United States of America.
Yasser RoudiKavli Institute for Systems Neuroscience and Centre for Algorithms in the Cortex, Faculty of Medicine and Health Sciences, Norwegian University of Science and Technology, Trondheim, Norway.ORCID 0000-0002-6989-3420

Funding

Research Council of Norway Centre for Algorithms in the CortexResearch Council of Norway Centre for Neural ComputationResearch Council of Norway Centre NORBRAINThe Kavli Foundation
6 · The paper itself

Abstract

Persistent homology applied to the activity of grid cells in the Medial Entorhinal Cortex suggests that this activity lies on a toroidal manifold. By analyzing real data and a simple model, we show that neural oscillations play a key role in the appearance of this toroidal topology. To quantitatively monitor how changes in spike trains influence the topology of the data, we first define a robust measure for the degree of toroidality of a dataset. Using this measure, we find that small perturbations ([Formula: see text]100 ms) of spike times have little influence on both the toroidality and the hexagonality of the ratemaps. Jittering spikes by [Formula: see text]100-500 ms, however, destroys the toroidal topology, while still having little impact on grid scores. These critical jittering time scales fall in the range of the periods of oscillations between the theta and eta bands. We thus hypothesized that these oscillatory modulations of neuronal spiking play a key role in the appearance and robustness of toroidal topology and the hexagonal spatial selectivity is not sufficient. We confirmed this hypothesis using a simple model for the activity of grid cells, consisting of an ensemble of independent rate-modulated Poisson processes. When these rates were modulated by oscillations, the network behaved similarly to the real data in exhibiting toroidal topology, even when the position of the fields were perturbed. In the absence of oscillations, this similarity was substantially lower. Furthermore, we find that the experimentally recorded spike trains indeed exhibit temporal modulations at the eta and theta bands, and that the ratio of the power in the eta band to that of the theta band, [Formula: see text], correlates with the critical jittering time at which the toroidal topology disappears.

Indexed as

Entorhinal CortexGrid CellsModels, NeurologicalAction PotentialsAnimalsComputational BiologyComputer Simulation

Identifiers

PMID39879234
PMCPMC12165393

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.