Evidence map›Paper›PMID 39879188›Full record

ArticlePLoS biology2025

Decreased SynMuv B gene activity in response to viral infection leads to activation of the antiviral RNAi pathway in C. elegans.

Ashwin Seetharaman, Himani Galagali, Elizabeth Linarte, Mona H X Liu, Jennifer D Cohen, Kashish Chetal, Ruslan Sadreyev, Alex J Tate, Taiowa A Montgomery, Gary Ruvkun

Abstract read
In one paragraph

Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ashwin SeetharamanDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Himani GalagaliDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Elizabeth LinarteDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Mona H X LiuDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Jennifer D CohenDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Kashish ChetalDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Ruslan SadreyevDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Alex J TateDepartment of Biology, Colorado State University, Fort Collins, Colorado, United States of America.
Taiowa A MontgomeryDepartment of Biology, Colorado State University, Fort Collins, Colorado, United States of America.
Gary RuvkunDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.ORCID 0000-0002-7473-8484

Funding

ROLE OF DIETARY CONSTITUENTS ON GENE EXPRESSION IN INTESTINAL EPITHELIUMP30DK040561 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Elizabeth Austen Lawson, Takara Leah Stanley · 1994 to 2026
$31.6M
CONTROL OF THE C ELEGANS LINEAGE BY HETEROCHRONIC GENESR01GM044619 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI GARY B RUVKUN · 1991 to 2026
$14.5M
Mechanism and function of small RNAs in development and gene silencing in the germlineR35GM119775 · NIGMS · COLORADO STATE UNIVERSITY · PI Taiowa Akoni Montgomery · 2016 to 2026
$4.3M
NIDDK NIH HHS P30 DK040561NIGMS NIH HHS R01 GM044619NIGMS NIH HHS R35 GM119775
6 · The paper itself

Abstract

RNA interference (RNAi) mediates antiviral defense in many eukaryotes. Caenorhabditis elegans mutants that disable RNAi are more sensitive to viral infection. Many mutants that enhance RNAi have also been identified; these mutations may reveal genes that are normally down-regulated in antiviral defense. About one-third of the score of mutants that enhance RNAi are in synMuv B genes, identified 30 years ago in unrelated screens for increased growth factor signaling. Many synMuv B genes encode dREAM complex chromatin-regulatory proteins found in nearly all animals and plants. We show that mRNAs which are highly induced in synMuv B mutants are congruent with those induced by Orsay RNA virus infection, suggesting that the enhanced RNAi of synMuv B mutants may also be triggered by down-regulation of synMuvB gene activity in an Orsay virus infection of wild type. The multivulval (Muv) phenotype of synMuv B mutants requires the presence of a second nematode-specific synMuv A gene mutation, but the enhanced RNAi of synMuv B mutants does not require a second synMuv A mutation. To test if Orsay viral infection down-regulates synMuv B gene activity, we infected a single synMuv A mutant with Orsay virus and found that a Muv phenotype could be induced. Thus, decreased synMuv B gene activity is part of the normal C. elegans viral defense response. In support of the model that decreased syn- Muv B gene activity enhances antiviral response, we found that synMuv B mutants have 50 to 100× lower viral RNA levels during an Orsay virus infection than wild type. Thus down-regulation of synMuv B activity to enhance RNAi is a key component in the defense response to viral infection. Small RNA deep sequencing analysis of dREAM complex mutants revealed siRNA profiles indicative of such a response. Thus, the pan-eukaryotic synMuv B genes constitute an element in C. elegans antiviral defense which is conserved across many eukaryotes where it also may act in viral defense. The enhanced RNAi and conservation of the dREAM complex mutants suggests new therapeutic avenues to boost antiviral defenses.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsRNA InterferenceAnimalsMutationNodaviridaeCaenorhabditis elegans Proteins

Identifiers

PMID39879188
PMCPMC11778786

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.